RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SSX9Q7RTT3 188 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 MRPL21Q7Z2W9 205 aaKnown RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 PID1Q7Z2X4 250 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 TRIM69Q86WT6 500 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 C10orf67Q8IYJ2 551 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 ZNF100Q8IYN0 542 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 CMTM8Q8IZV2 173 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 ZFP82Q8N141 532 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 ARHGAP18Q8N392 663 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 LRRC75AQ8NAA5 344 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 OR4C5Q8NGB2 326 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 OR8K1Q8NGG5 319 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 OR6X1Q8NH79 312 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 M1APQ8TC57 530 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 SPRYD4Q8WW59 207 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 SLC38A4Q969I6 547 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 C18orf25Q96B23 403 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 VSTM2LQ96N03 204 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 AMDHD1Q96NU7 426 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 OPALINQ96PE5 141 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 SMIM14Q96QK8 99 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 TGS1Q96RS0 853 aaKnown RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 NAPGQ99747 312 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 DUSP16Q9BY84 665 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 GSDMCQ9BYG8 508 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 SLC38A1Q9H2H9 487 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 NARFLQ9H6Q4 476 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 RANBP3Q9H6Z4 567 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 GPN2Q9H9Y4 310 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 UGT1A10Q9HAW8 530 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 LPAR2Q9HBW0 351 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 ZNF331Q9NQX6 463 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 DIABLOQ9NR28 239 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 STMN3Q9NZ72 180 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 EHFQ9NZC4 300 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 STOX2Q9P2F5 926 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 FBXL3Q9UKT7 428 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 GINS2Q9Y248 185 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 ERGIC3Q9Y282 383 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 GSTK1Q9Y2Q3 226 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 WIF1Q9Y5W5 379 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 MRPS18BQ9Y676 258 aaKnown RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 ELP1O95163 1332 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 IGLV3-16A0A075B6K0 115 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 A0A1B0GUS0 222 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 SMCO3A2RU48 225 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 TMEM114B3SHH9 223 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 E5RI56 91 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 E9PLD3 99 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 OR2J3O76001 311 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 B3GAT3O94766 335 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 STK17BO94768 372 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 SNAPINO95295 136 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 CST4P01036 141 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 FGGP02679 453 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 RPN2P04844 631 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 GP1BAP07359 652 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 ANXA5P08758 320 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 UBCP0CG48 685 aaKnown RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 DBTP11182 482 aaKnown RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 GTF2E2P29084 291 aaKnown RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 CRABP2P29373 138 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 CDH5P33151 784 aaPredicted RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 CD79BP40259 229 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 AQP2P41181 271 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 MAGEA6P43360 314 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 PSMD4P55036 377 aaKnown RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 RPS6P62753 249 aaKnown RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 LCN2P80188 198 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 EWSR1Q01844 656 aaKnown RBP eCLIP2.09□□□□□ -2.07
CLK1-204ENST00000432425 C2orf54Q08AI8 447 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 BST2Q10589 180 aaKnown RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 VGLL4Q14135 290 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 MPPED2Q15777 294 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 SLC15A2Q16348 729 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 TNXAQ16473 311 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 TATDN3Q17R31 274 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 TFDP3Q5H9I0 405 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 C6orf226Q5I0X4 101 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 TMEM225Q6GV28 225 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 OR4F3Q6IEY1 312 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 SLC8B1Q6J4K2 584 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 PNCKQ6P2M8 343 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 MBOAT1Q6ZNC8 495 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 SCD5Q86SK9 330 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 SLC26A11Q86WA9 606 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 NATD1Q8N6N6 113 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 GATSQ8NAP1 163 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 OR5AU1Q8NGC0 362 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 OR51G2Q8NGK0 314 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 OR1L6Q8NGR2 347 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 NUBPLQ8TB37 319 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 GIPC3Q8TF64 312 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 PIH1D2Q8WWB5 315 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 DNAJB3Q8WWF6 145 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 NEIL2Q969S2 332 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 TADA1Q96BN2 335 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 FGGYQ96C11 551 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 STARD4Q96DR4 205 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms