RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PLP2Q04941 152 aa12.69□□□□□ -0.38
SGCE-204ENST00000428696 SPOCK1Q08629 439 aa12.69□□□□□ -0.38
SGCE-204ENST00000428696 RAB39AQ14964 217 aa12.69□□□□□ -0.38
SGCE-204ENST00000428696 PTGES3Q15185 160 aaKnown RBP12.69□□□□□ -0.38
SGCE-204ENST00000428696 SNAPC1Q16533 368 aa12.69□□□□□ -0.38
SGCE-204ENST00000428696 ZIK1Q3SY52 487 aaPredicted RBP12.69□□□□□ -0.38
SGCE-204ENST00000428696 OR10H5Q8NGA6 315 aa12.69□□□□□ -0.38
SGCE-204ENST00000428696 OR51V1Q9H2C8 321 aa12.69□□□□□ -0.38
SGCE-204ENST00000428696 UNC79Q9P2D8 2635 aa12.69□□□□□ -0.38
SGCE-204ENST00000428696 EI24O14681 340 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 SCG5P05408 212 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 CLUP10909 449 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 ANPEPP15144 967 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 GRK5P34947 590 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 POLR2IP36954 125 aaKnown RBP12.68□□□□□ -0.38
SGCE-204ENST00000428696 ESRRGP62508 458 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 DAG1Q14118 895 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 MEP1BQ16820 701 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 FAM27BQ5VT28 67 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 KDM4DQ6B0I6 523 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 PLBD1Q6P4A8 553 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 VHLLQ6RSH7 139 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 ZBTB49Q6ZSB9 765 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 ZNF627Q7L945 461 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 KBTBD8Q8NFY9 601 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 OR6K6Q8NGW6 343 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 OR2T4Q8NH00 348 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 C11orf40Q8WZ69 217 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 AKAP1Q92667 903 aaKnown RBP eCLIP12.68□□□□□ -0.38
SGCE-204ENST00000428696 NEUROG1Q92886 237 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 BOD1Q96IK1 185 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 C9orf16Q9BUW7 83 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 OSBPL10Q9BXB5 764 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 GABARAPL1Q9H0R8 117 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 NOX3Q9HBY0 568 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 POLE4Q9NR33 117 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 CMC2Q9NRP2 79 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 B3GNT2Q9NY97 397 aa12.68□□□□□ -0.38
SGCE-204ENST00000428696 PRR14LQ5THK1 2151 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 IQCMA0A1B0GVH7 501 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 TVP23AA6NH52 213 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 PRR23D1E9PI22 279 aaPredicted RBP12.67□□□□□ -0.38
SGCE-204ENST00000428696 CECR9P0C854 216 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 PRR23D2P0DMB1 279 aaPredicted RBP12.67□□□□□ -0.38
SGCE-204ENST00000428696 ZNF32P17041 273 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 PCBD1P61457 104 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 ELF3P78545 371 aaPredicted RBP12.67□□□□□ -0.38
SGCE-204ENST00000428696 CDK5Q00535 292 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 GLO1Q04760 184 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 TRIP10Q15642 601 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 KLHL12Q53G59 568 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 ZNF362Q5T0B9 420 aaPredicted RBP12.67□□□□□ -0.38
SGCE-204ENST00000428696 SEZ6L2Q6UXD5 910 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 PARP8Q8N3A8 854 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 GALNT4Q8N4A0 578 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 AKR7LQ8NHP1 331 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 NABP1Q96AH0 204 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 FBXO17Q96EF6 278 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 ZNF416Q9BWM5 594 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 LIME1Q9H400 295 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 MOV10Q9HCE1 1003 aaKnown RBP12.67□□□□□ -0.38
SGCE-204ENST00000428696 ZNF224Q9NZL3 707 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 ENOPH1Q9UHY7 261 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 TIMM10BQ9Y5J6 103 aa12.67□□□□□ -0.38
SGCE-204ENST00000428696 TACC2O95359 2948 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 ABCA12Q86UK0 2595 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 IGLV1-36A0A0B4J1U3 117 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 FAM221AA4D161 298 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 ATP6V1G2-DDX39BF2Z307 99 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 GOSR1O95249 250 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 CCL2P13500 99 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 ZNF823P16415 610 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 PAX7P23759 505 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 EPHA2P29317 976 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 CDH11P55287 796 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 RPS7P62081 194 aaKnown RBP12.66□□□□□ -0.38
SGCE-204ENST00000428696 TEKQ02763 1124 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 NRN1LQ496H8 165 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 PABPC1L2AQ5JQF8 200 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 TMEM154Q6P9G4 183 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 DPPA2Q7Z7J5 298 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 MYPOPQ86VE0 399 aaPredicted RBP12.66□□□□□ -0.38
SGCE-204ENST00000428696 CPOQ8IVL8 374 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 ALDH16A1Q8IZ83 802 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 LURAP1Q96LR2 239 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 OR51B6Q9H340 312 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 CISD1Q9NZ45 108 aaKnown RBP12.66□□□□□ -0.38
SGCE-204ENST00000428696 ASH2LQ9UBL3 628 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 TMEFF2Q9UIK5 374 aaPredicted RBP12.66□□□□□ -0.38
SGCE-204ENST00000428696 FKBP7Q9Y680 259 aa12.66□□□□□ -0.38
SGCE-204ENST00000428696 A0A1W2PPR1 153 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 M0R129 80 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 SURF4O15260 269 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 SERPINA5P05154 406 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 CST2P09228 141 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 SPI1P17947 270 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 APEX1P27695 318 aaKnown RBP12.65□□□□□ -0.38
SGCE-204ENST00000428696 LOXP28300 417 aaPredicted RBP12.65□□□□□ -0.38
SGCE-204ENST00000428696 FMO3P31513 532 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 APLNRP35414 380 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms