RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 TRAV27A0A087WT01 109 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 IGHV1-69-2A0A0G2JMI3 117 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 C5orf49A4QMS7 147 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 ZSCAN5BA6NJL1 495 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 BBIP1A8MTZ0 92 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 RGS9O75916 674 aaPredicted RBP13.19□□□□□ -0.3
SEC13-210ENST00000428626 NGFP01138 241 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 NPPAP01160 153 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 PTHP01270 115 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 IGHV1-46P01743 117 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 IGHMP01871 453 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 ZNF26P17031 533 aaPredicted RBP13.19□□□□□ -0.3
SEC13-210ENST00000428626 LAP3P28838 519 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 SELENOVP59797 346 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 SELENOWP63302 87 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 PCGF3Q3KNV8 242 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 FAM27BQ5VT28 67 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 THSD4Q6ZMP0 1018 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 FOXL2NBQ6ZUU3 175 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 POU5F2Q8N7G0 328 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 OR51F2Q8NH61 342 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 SLC25A40Q8TBP6 338 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 SNX33Q8WV41 574 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 PRRC1Q96M27 445 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 OR2H1Q9GZK4 316 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 OR2J1Q9GZK6 312 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 OCEL1Q9H607 264 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 ZNF665Q9H7R5 613 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 CCNB1IP1Q9NPC3 277 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 ARMCX1Q9P291 453 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 WIPI2Q9Y4P8 454 aa13.19□□□□□ -0.3
SEC13-210ENST00000428626 TANC2Q9HCD6 1990 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 H7C1C5 153 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 PLPP2O43688 288 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 PRSS23O95084 383 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 PCMT1P22061 227 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 CTXN1P60606 82 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 RPL27P61353 136 aaKnown RBP13.18□□□□□ -0.3
SEC13-210ENST00000428626 LCN6P62502 163 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 ST3GAL3Q11203 375 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 ENDOGQ14249 297 aaKnown RBP13.18□□□□□ -0.3
SEC13-210ENST00000428626 ZNF774Q6NX45 483 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 FAHD2BQ6P2I3 314 aaPredicted RBP13.18□□□□□ -0.3
SEC13-210ENST00000428626 HDDC2Q7Z4H3 204 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 TSEN54Q7Z6J9 526 aaKnown RBP13.18□□□□□ -0.3
SEC13-210ENST00000428626 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 OR2T12Q8NG77 320 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 OR13C2Q8NGS9 318 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 OR51A7Q8NH64 312 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 KLF14Q8TD94 323 aaPredicted RBP13.18□□□□□ -0.3
SEC13-210ENST00000428626 RCN3Q96D15 328 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 FAHD2AQ96GK7 314 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 ALG12Q9BV10 488 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 LRMDAQ9H2I8 198 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 DCAF16Q9NXF7 216 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 GPR160Q9UJ42 338 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 GRIP1Q9Y3R0 1128 aa13.18□□□□□ -0.3
SEC13-210ENST00000428626 LOC105371242A0A075B767 164 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 ELOVL7A1L3X0 281 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 HAX1O00165 279 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 SPRY3O43610 288 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 IFNA14P01570 189 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 IGHV2-5P01817 119 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 TROVE2P10155 538 aaKnown RBP eCLIP13.17□□□□□ -0.3
SEC13-210ENST00000428626 ZNF81P51508 661 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 TBPL2Q6SJ96 375 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 ZNF771Q7L3S4 317 aaPredicted RBP13.17□□□□□ -0.3
SEC13-210ENST00000428626 SLC15A3Q8IY34 581 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 OFCC1Q8IZS5 231 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 TMPRSS13Q9BYE2 586 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 POFUT1Q9H488 388 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 SAP30LQ9HAJ7 183 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 STX18Q9P2W9 335 aaKnown RBP13.17□□□□□ -0.3
SEC13-210ENST00000428626 KLHL21Q9UJP4 597 aa13.17□□□□□ -0.3
SEC13-210ENST00000428626 A0A087WUU8 490 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 TRAV20A0A0B4J274 112 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 CDC42EP2O14613 210 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 ICMTO60725 284 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 UBOX5O94941 541 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 MPZL1O95297 269 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 PNPP00491 289 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 CST2P09228 141 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 DRD4P21917 467 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 GDI2P50395 445 aaKnown RBP13.16□□□□□ -0.3
SEC13-210ENST00000428626 PRKCDQ05655 676 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 TAF11Q15544 211 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 MAPRE2Q15555 327 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 ZNF718Q3SXZ3 478 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 MBNL2Q5VZF2 373 aaKnown RBP13.16□□□□□ -0.3
SEC13-210ENST00000428626 OTPQ5XKR4 325 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 ACSM5Q6NUN0 579 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 ABHD4Q8TB40 342 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 GEMIN6Q8WXD5 167 aaKnown RBP13.16□□□□□ -0.3
SEC13-210ENST00000428626 KCNN2Q9H2S1 579 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 MSL2Q9HCI7 577 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 EMC7Q9NPA0 242 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 DECR2Q9NUI1 292 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 GID8Q9NWU2 228 aa13.16□□□□□ -0.3
SEC13-210ENST00000428626 ADAM18Q9Y3Q7 739 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms