RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ZNF74Q16587 644 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 MTX3Q5HYI7 312 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 TMEM255AQ5JRV8 349 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 OLFML2AQ68BL7 652 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 ZNF613Q6PF04 617 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 LRRN1Q6UXK5 716 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 C9orf139Q6ZV77 190 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 ZER1Q7Z7L7 766 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 ARMC8Q8IUR7 673 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 ALDH16A1Q8IZ83 802 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 OR9I1Q8NGQ6 314 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 AKR7LQ8NHP1 331 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 ARHGDIGQ99819 225 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 WFDC6Q9BQY6 131 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 EVA1AQ9H8M9 152 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 IL20RAQ9UHF4 553 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 KLHL21Q9UJP4 597 aa12.33□□□□□ -0.44
PDAP1-202ENST00000426447 LOC100509620A0A075B734 347 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 MDFIC2A0A1B0GVS7 189 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 A0A1W2PRG6 482 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 A8MXK9 166 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 UBDO15205 165 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 CHP2O43745 196 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 FMO6PO60774 539 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 CDAP32320 146 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 SCARB2Q14108 478 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 ZMYND11Q15326 602 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 HIST3H3Q16695 136 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 KRT71Q3SY84 523 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 HIST2H2BDQ6DRA6 164 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 FIP1L1Q6UN15 594 aaKnown RBP12.32□□□□□ -0.44
PDAP1-202ENST00000426447 LINC00114Q6XXX2 140 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 NANOGNBQ7Z5D8 188 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 OR2Z1Q8NG97 314 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 SAMD8Q96LT4 415 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 ELOVL3Q9HB03 270 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 SSU72Q9NP77 194 aaKnown RBP12.32□□□□□ -0.44
PDAP1-202ENST00000426447 SLCO1B3Q9NPD5 702 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 SDR39U1Q9NRG7 319 aaPredicted RBP12.32□□□□□ -0.44
PDAP1-202ENST00000426447 ZNF229Q9UJW7 825 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 PPP1R3CQ9UQK1 317 aa12.32□□□□□ -0.44
PDAP1-202ENST00000426447 VWFP04275 2813 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 TRAV40A0A0B4J280 105 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 CPSF4LA6NMK7 179 aaKnown RBP12.31□□□□□ -0.44
PDAP1-202ENST00000426447 NGFP01138 241 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 F13BP05160 661 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 PPIAL4GP0DN37 164 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 MDH2P40926 338 aaKnown RBP12.31□□□□□ -0.44
PDAP1-202ENST00000426447 ERVK-25P63136 954 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 MRPS34P82930 218 aaKnown RBP12.31□□□□□ -0.44
PDAP1-202ENST00000426447 PSG4Q00888 419 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 CDK5R2Q13319 367 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 TAF11Q15544 211 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 DEFB112Q30KQ8 113 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 ARL9Q6T311 187 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 RFPL4BQ6ZWI9 263 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 HDDC2Q7Z4H3 204 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 C1QL4Q86Z23 238 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 MUC20Q8N307 709 aaPredicted RBP12.31□□□□□ -0.44
PDAP1-202ENST00000426447 ZNF283Q8N7M2 679 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 SMYD1Q8NB12 490 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 NOXO1Q8NFA2 376 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 OR10S1Q8NGN2 331 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 THOC1Q96FV9 657 aaKnown RBP12.31□□□□□ -0.44
PDAP1-202ENST00000426447 CITED1Q99966 193 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 SLC30A2Q9BRI3 323 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 SSBP3Q9BWW4 388 aaPredicted RBP12.31□□□□□ -0.44
PDAP1-202ENST00000426447 MRPL13Q9BYD1 178 aaKnown RBP12.31□□□□□ -0.44
PDAP1-202ENST00000426447 CENPHQ9H3R5 247 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 THAP1Q9NVV9 213 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 LRCH1Q9Y2L9 728 aa12.31□□□□□ -0.44
PDAP1-202ENST00000426447 CLPSL1A2RUU4 121 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 SRRM5B3KS81 715 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 F5H0A9 414 aaPredicted RBP12.3□□□□□ -0.44
PDAP1-202ENST00000426447 H3BSA7 217 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 M0R3H8 397 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 SURF4O15260 269 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 TRMUO75648 421 aaKnown RBP12.3□□□□□ -0.44
PDAP1-202ENST00000426447 SLC2A10O95528 541 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 PLATP00750 562 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 VIMP08670 466 aaKnown RBP12.3□□□□□ -0.44
PDAP1-202ENST00000426447 WNT2P09544 360 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 ACADSP16219 412 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 PPIBP23284 216 aaKnown RBP12.3□□□□□ -0.44
PDAP1-202ENST00000426447 GUCA1AP43080 201 aaPredicted RBP12.3□□□□□ -0.44
PDAP1-202ENST00000426447 GNB2P62879 340 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 PSG7Q13046 419 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 ENTPD8Q5MY95 495 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 BRD3OSQ6XYD6 125 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 RAB40AQ8WXH6 277 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 NSMAFQ92636 917 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 UPRTQ96BW1 309 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 C4orf45Q96LM5 186 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 RBM4BQ9BQ04 359 aaKnown RBP12.3□□□□□ -0.44
PDAP1-202ENST00000426447 TMEM109Q9BVC6 243 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 SLC25A37Q9NYZ2 338 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 SLC7A7Q9UM01 511 aa12.3□□□□□ -0.44
PDAP1-202ENST00000426447 CEACAM18A8MTB9 384 aa12.29□□□□□ -0.44
PDAP1-202ENST00000426447 CENPBD1B2RD01 187 aa12.29□□□□□ -0.44
PDAP1-202ENST00000426447 ASAH2BP0C7U1 165 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms