RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 TNFRSF10CO14798 259 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 ARPC3O15145 178 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 OIP5O43482 229 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 WDPCPO95876 746 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 CSTAP01040 98 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 HOXC4P09017 264 aaPredicted RBP12.94□□□□□ -0.34
MSH5-206ENST00000423982 MYF5P13349 255 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 CCKBRP32239 447 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 CSF2RBP32927 897 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 PRSS3P35030 304 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 KIR3DL2P43630 455 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 CTXN1P60606 82 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 ERV3-1Q14264 604 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 TAF13Q15543 124 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 OR10K2Q6IF99 312 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 JMJD6Q6NYC1 403 aaPredicted RBP12.94□□□□□ -0.34
MSH5-206ENST00000423982 SLC35D2Q76EJ3 337 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 ABHD13Q7L211 337 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 SLC16A9Q7RTY1 509 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 MCATQ8IVS2 390 aaKnown RBP12.94□□□□□ -0.34
MSH5-206ENST00000423982 GABRG1Q8N1C3 465 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 C12orf45Q8N5I9 185 aaPredicted RBP12.94□□□□□ -0.34
MSH5-206ENST00000423982 C3orf49Q96BT1 292 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 LAMP5Q9UJQ1 280 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 SLC22A13Q9Y226 551 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 FARSAQ9Y285 508 aaKnown RBP12.94□□□□□ -0.34
MSH5-206ENST00000423982 CACNA1EQ15878 2313 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 OR5H14A6NHG9 310 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 TGFBR3LH3BV60 316 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 WNT11O96014 354 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 F12P00748 615 aaPredicted RBP12.94□□□□□ -0.34
MSH5-206ENST00000423982 S1PR1P21453 382 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 CCR4P51679 360 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 CTAG1AP78358 180 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 GUCA2BQ16661 112 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 CLVS2Q5SYC1 327 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 OR2W3Q7Z3T1 314 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 CA13Q8N1Q1 262 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 TSEN15Q8WW01 171 aaKnown RBP12.94□□□□□ -0.34
MSH5-206ENST00000423982 ZNF471Q9BX82 626 aaPredicted RBP12.94□□□□□ -0.34
MSH5-206ENST00000423982 SLC25A32Q9H2D1 315 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 CDV3Q9UKY7 258 aaKnown RBP12.94□□□□□ -0.34
MSH5-206ENST00000423982 PRELID3BQ9Y3B1 194 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 A0A1B0GTQ1 180 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 TMEM82A0PJX8 343 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 TACSTD2P09758 323 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 MGMTP16455 207 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 ZNF28P17035 718 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 RPS4XP62701 263 aaKnown RBP12.93□□□□□ -0.34
MSH5-206ENST00000423982 UBE2IP63279 158 aaKnown RBP12.93□□□□□ -0.34
MSH5-206ENST00000423982 SERTAD2Q14140 314 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 NKPD1Q17RQ9 610 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 SCGB2B2Q4G0G5 96 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 WDR38Q5JTN6 314 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 LYSMD4Q5XG99 296 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 ZNF627Q7L945 461 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 FAM122BQ7Z309 247 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 EXD3Q8N9H8 876 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 OR2I1PQ8NGU4 316 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 SLC37A2Q8TED4 501 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 MRPL48Q96GC5 212 aaKnown RBP12.93□□□□□ -0.34
MSH5-206ENST00000423982 VRK1Q99986 396 aaPredicted RBP12.93□□□□□ -0.34
MSH5-206ENST00000423982 MICU1Q9BPX6 476 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 SLC6A15Q9H2J7 730 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 SMOC1Q9H4F8 434 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 ZNF768Q9H5H4 540 aaKnown RBP12.93□□□□□ -0.34
MSH5-206ENST00000423982 KCNG2Q9UJ96 466 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 ZNF175Q9Y473 711 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 ASXL3Q9C0F0 2248 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 TRBV5-7A0A0A0MS05 114 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 ELOA3DA6NLF2 546 aaPredicted RBP12.93□□□□□ -0.34
MSH5-206ENST00000423982 FOXS1O43638 330 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 SLC25A12O75746 678 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 TPPPO94811 219 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 AK1P00568 194 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 AMY2AP04746 511 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 ITGB2P05107 769 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 CNR1P21554 472 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 MAPK3P27361 379 aaPredicted RBP12.93□□□□□ -0.34
MSH5-206ENST00000423982 GPR143P51810 404 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 AFF3P51826 1226 aaKnown RBP12.93□□□□□ -0.34
MSH5-206ENST00000423982 GPR18Q14330 331 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 ELOA3BQ3SY89 546 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 PABPC1L2AQ5JQF8 200 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 MOB3CQ70IA8 216 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 CBLN2Q8IUK8 224 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 ELOA3Q8NG57 546 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 OR4S1Q8NGB4 309 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 OR1S2Q8NGQ3 325 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 OR9A4Q8NGU2 314 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 FAM3DQ96BQ1 224 aa12.93□□□□□ -0.34
MSH5-206ENST00000423982 PATE3B3GLJ2 98 aa12.92□□□□□ -0.34
MSH5-206ENST00000423982 CFIP05156 583 aa12.92□□□□□ -0.34
MSH5-206ENST00000423982 ATP1B3P54709 279 aa12.92□□□□□ -0.34
MSH5-206ENST00000423982 SQSTM1Q13501 440 aa12.92□□□□□ -0.34
MSH5-206ENST00000423982 ZCCHC12Q6PEW1 402 aa12.92□□□□□ -0.34
MSH5-206ENST00000423982 UNQ6126/PRO20091Q6UXV3 157 aa12.92□□□□□ -0.34
MSH5-206ENST00000423982 CDC20BQ86Y33 519 aa12.92□□□□□ -0.34
MSH5-206ENST00000423982 ZNF595Q8IYB9 648 aa12.92□□□□□ -0.34
MSH5-206ENST00000423982 CAMKVQ8NCB2 501 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms