RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ZNF620Q6ZNG0 422 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 SVOPLQ8N434 492 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 LINC00471Q8N535 108 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 OR9Q2Q8NGE9 314 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 SMR3AQ99954 134 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 SYT4Q9H2B2 425 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 POLE4Q9NR33 117 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 VSX1Q9NZR4 365 aaPredicted RBP22.78■■□□□ 1.24
CDK9-202ENST00000421939 FBXO9Q9UK97 447 aaPredicted RBP22.78■■□□□ 1.24
CDK9-202ENST00000421939 CST2P09228 141 aa22.77■■□□□ 1.24
CDK9-202ENST00000421939 RAP2AP10114 183 aa22.77■■□□□ 1.24
CDK9-202ENST00000421939 CCL2P13500 99 aa22.77■■□□□ 1.24
CDK9-202ENST00000421939 CTLA4P16410 223 aa22.77■■□□□ 1.24
CDK9-202ENST00000421939 GLRXP35754 106 aa22.77■■□□□ 1.24
CDK9-202ENST00000421939 EFNA4P52798 201 aa22.77■■□□□ 1.24
CDK9-202ENST00000421939 OR2T5Q6IEZ7 315 aa22.77■■□□□ 1.24
CDK9-202ENST00000421939 PAQR4Q8N4S7 273 aaPredicted RBP22.77■■□□□ 1.24
CDK9-202ENST00000421939 OR1J2Q8NGS2 313 aa22.77■■□□□ 1.24
CDK9-202ENST00000421939 OR2T29Q8NH02 315 aa22.77■■□□□ 1.24
CDK9-202ENST00000421939 BTBD10Q9BSF8 475 aa22.77■■□□□ 1.24
CDK9-202ENST00000421939 NF1P21359 2839 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 AQP12BA6NM10 295 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 CCNB2O95067 398 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 SNAP29O95721 258 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 APEX1P27695 318 aaKnown RBP22.76■■□□□ 1.23
CDK9-202ENST00000421939 PPOXP50336 477 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 MSMPQ1L6U9 139 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 PGM2L1Q6PCE3 622 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 CLEC2AQ6UVW9 174 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 PTCHD4Q6ZW05 846 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 AQP12AQ8IXF9 295 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 ADGRG5Q8IZF4 528 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 MRPL24Q96A35 216 aaKnown RBP22.76■■□□□ 1.23
CDK9-202ENST00000421939 SAMD8Q96LT4 415 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 ERMAPQ96PL5 475 aaPredicted RBP22.76■■□□□ 1.23
CDK9-202ENST00000421939 SORCS2Q96PQ0 1159 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 LRMDAQ9H2I8 198 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 REEP1Q9H902 201 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 VNN3Q9NY84 501 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 SAMHD1Q9Y3Z3 626 aaKnown RBP22.76■■□□□ 1.23
CDK9-202ENST00000421939 FKBP7Q9Y680 259 aa22.76■■□□□ 1.23
CDK9-202ENST00000421939 FAM171A2A8MVW0 826 aa22.75■■□□□ 1.23
CDK9-202ENST00000421939 IMPA2O14732 288 aa22.75■■□□□ 1.23
CDK9-202ENST00000421939 APLNRP35414 380 aa22.75■■□□□ 1.23
CDK9-202ENST00000421939 PCBD1P61457 104 aa22.75■■□□□ 1.23
CDK9-202ENST00000421939 PPP1R8Q12972 351 aaKnown RBP22.75■■□□□ 1.23
CDK9-202ENST00000421939 ENDOGQ14249 297 aaKnown RBP22.75■■□□□ 1.23
CDK9-202ENST00000421939 ZNF770Q6IQ21 691 aaPredicted RBP22.75■■□□□ 1.23
CDK9-202ENST00000421939 CPEB3Q8NE35 698 aaKnown RBP22.75■■□□□ 1.23
CDK9-202ENST00000421939 AKR7LQ8NHP1 331 aa22.75■■□□□ 1.23
CDK9-202ENST00000421939 DOK1Q99704 481 aa22.75■■□□□ 1.23
CDK9-202ENST00000421939 VRK1Q99986 396 aaPredicted RBP22.75■■□□□ 1.23
CDK9-202ENST00000421939 IFT27Q9BW83 186 aa22.75■■□□□ 1.23
CDK9-202ENST00000421939 ZNF416Q9BWM5 594 aa22.75■■□□□ 1.23
CDK9-202ENST00000421939 OR2H1Q9GZK4 316 aa22.75■■□□□ 1.23
CDK9-202ENST00000421939 C2CD3Q4AC94 2353 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 TMEM129A0AVI4 362 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 DHRS12A0PJE2 317 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 C12orf71A8MTZ7 269 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 RNF223E7ERA6 249 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 ARPC3O15145 178 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 SLC16A7O60669 478 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 KHDRBS3O75525 346 aaKnown RBP22.74■■□□□ 1.23
CDK9-202ENST00000421939 DNAJC8O75937 253 aaPredicted RBP22.74■■□□□ 1.23
CDK9-202ENST00000421939 CDKN2AP42771 156 aaKnown RBP22.74■■□□□ 1.23
CDK9-202ENST00000421939 DSCR9P59020 149 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 PSG4Q00888 419 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 BNIP1Q12981 228 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 FLOT2Q14254 428 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 ZNF525Q8N782 197 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 FOXN4Q96NZ1 517 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 MRPL37Q9BZE1 423 aaKnown RBP22.74■■□□□ 1.23
CDK9-202ENST00000421939 RERGLQ9H628 205 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 DYNLRB1Q9NP97 96 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 EMC7Q9NPA0 242 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 CDH10Q9Y6N8 788 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 U3KQV3 271 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 TLN2Q9Y4G6 2542 aa22.74■■□□□ 1.23
CDK9-202ENST00000421939 LY6HO94772 140 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 SCG5P05408 212 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 FAM157BP0CG42 384 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 STOMP27105 288 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 EVX1P49640 407 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 RPL13AP3Q6NVV1 102 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 UGT2A3Q6UWM9 527 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 CLEC9AQ6UXN8 241 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 SYT9Q86SS6 491 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 JAZF1Q86VZ6 243 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 GLB1L2Q8IW92 636 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 AQP11Q8NBQ7 271 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 RHNO1Q9BSD3 238 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 CHID1Q9BWS9 393 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 REG4Q9BYZ8 158 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 WNT5BQ9H1J7 359 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 TIMM10BQ9Y5J6 103 aa22.73■■□□□ 1.23
CDK9-202ENST00000421939 ZFHX3Q15911 3703 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 F12P00748 615 aaPredicted RBP22.72■■□□□ 1.23
CDK9-202ENST00000421939 CSF3P09919 207 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 PCSK6P29122 969 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 DNM1P34Q6PK57 102 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms