RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 B3GLCTQ6Y288 498 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 ABHD12BQ7Z5M8 362 aaPredicted RBP12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 SYT9Q86SS6 491 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 GPR137CQ8N3F9 429 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 BCL7BQ9BQE9 202 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 ULBP2Q9BZM5 246 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 NELFAQ9H3P2 528 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 SIAEQ9HAT2 523 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 POLE4Q9NR33 117 aa12.59□□□□□ -0.39
SHMT1P1-201ENST00000419974 ZNF407Q9C0G0 2248 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 SETXQ7Z333 2677 aaKnown RBP12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 DPPA5A6NC42 116 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF670-ZNF695F2Z2N8 137 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF593O00488 134 aaPredicted RBP12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 SELENOFO60613 162 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 INMTO95050 263 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF823P16415 610 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 CEACAM8P31997 349 aaPredicted RBP12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 DCTDP32321 178 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 GUCA1AP43080 201 aaPredicted RBP12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 MAP2K4P45985 399 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF84P51523 738 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 TAS2R43P59537 309 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 TPBGQ13641 420 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 RAB39AQ14964 217 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 CCDC58Q4VC31 144 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 PHYHD1Q5SRE7 291 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 C1orf185Q5T7R7 199 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 SLC18B1Q6NT16 456 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 P4HA3Q7Z4N8 544 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 GPR141Q7Z602 305 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 ERI1Q8IV48 349 aaKnown RBP12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR10H4Q8NGA5 316 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR6K3Q8NGY3 331 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF420Q8TAQ5 688 aaPredicted RBP12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 NABP1Q96AH0 204 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 APH1AQ96BI3 265 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 TRIB1Q96RU8 372 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 MGLLQ99685 303 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 ALG8Q9BVK2 526 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 RBM38Q9H0Z9 239 aaKnown RBP12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 TP63Q9H3D4 680 aaPredicted RBP12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 GPR35Q9HC97 309 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 PLSCR4Q9NRQ2 329 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 BABAM2Q9NXR7 383 aa12.58□□□□□ -0.4
SHMT1P1-201ENST00000419974 FAM171A2A8MVW0 826 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 PRRG2O14669 202 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF254O75437 659 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 UPK3AO75631 287 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 MT-ND5P03915 603 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 LCKP06239 509 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 MSR1P21757 451 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 SH3BGRP55822 239 aaPredicted RBP12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 HIST1H3AP68431 136 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 RBPJQ06330 500 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 NEDD8Q15843 81 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 TIGD6Q17RP2 521 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 C1QTNF12Q5T7M4 302 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 HIST2H3PS2Q5TEC6 136 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 TSPO2Q5TGU0 170 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 RTL6Q6ICC9 239 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 KCTD18Q6PI47 426 aaPredicted RBP12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 PLEKHG7Q6ZR37 379 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 SEM1Q6ZVN7 128 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 HIST2H3AQ71DI3 136 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 DPY19L4Q7Z388 723 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 DPPA2Q7Z7J5 298 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 LHFPL3Q86UP9 236 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 ST6GALNAC3Q8NDV1 305 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 RPS4Y2Q8TD47 263 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 C11orf40Q8WZ69 217 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR5M11Q96RB7 305 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 DOK1Q99704 481 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 CRLF2Q9HC73 371 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 ASF1BQ9NVP2 202 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 TAS2R16Q9NYV7 291 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 LAMP5Q9UJQ1 280 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 COPS3Q9UNS2 423 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 EMC9Q9Y3B6 208 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 FAM215AQ9Y5M1 114 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 RELNP78509 3460 aa12.57□□□□□ -0.4
SHMT1P1-201ENST00000419974 DNAJC13O75165 2243 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 PYCARD-AS1I3L0S3 204 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 APOL3O95236 402 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 ABHD16AO95870 558 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 IL18BPO95998 194 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 HLA-DQA2P01906 255 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 MRPL3P09001 348 aaKnown RBP12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 TACSTD2P09758 323 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 CPEP16870 476 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 GALP22466 123 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 CTSSP25774 331 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 NAA10P41227 235 aaPredicted RBP12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 KIR2DL2P43627 348 aaPredicted RBP12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 TGM4P49221 684 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 RGS6P49758 472 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 ADAM8P78325 824 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 CARD17Q5XLA6 110 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 FBXW9Q5XUX1 488 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 FDX2Q6P4F2 183 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms