RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 KCNMB4Q86W47 210 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 TMEM173Q86WV6 379 aaPredicted RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 LRRC28Q86X40 367 aaPredicted RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 ANGPTL5Q86XS5 388 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 CBLN2Q8IUK8 224 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 ZDHHC21Q8IVQ6 265 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 SERPINA12Q8IW75 414 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 ZFP82Q8N141 532 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 FBXO39Q8N4B4 442 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 ARRDC1Q8N5I2 433 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 SPICQ8N5J4 248 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 ZNF383Q8NA42 475 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 GPR26Q8NDV2 337 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 FAM71CQ8NEG0 241 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 GPRC5AQ8NFJ5 357 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 OR5T3Q8NGG3 340 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 OR10K1Q8NGX5 313 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 OR6K3Q8NGY3 331 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 TRMT10AQ8TBZ6 339 aaKnown RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 RNF128Q8TEB7 428 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 CA5BP1Q8WTZ4 195 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 SMAP2Q8WU79 429 aaPredicted RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 PTPMT1Q8WUK0 201 aaPredicted RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 TWIST2Q8WVJ9 160 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 PCNPQ8WW12 178 aaKnown RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 APH1BQ8WW43 257 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 ACOT11Q8WXI4 607 aaPredicted RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 C22orf15Q8WYQ4 148 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 TMEM190Q8WZ59 177 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 SUSD6Q92537 303 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 GGHQ92820 318 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 ARL11Q969Q4 196 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 ISG20Q96AZ6 181 aaKnown RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 TADA1Q96BN2 335 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 MRPL38Q96DV4 380 aaKnown RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 MALSU1Q96EH3 234 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 MED8Q96G25 268 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 PYURFQ96I23 114 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 WFIKKN1Q96NZ8 548 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 LITAFQ99732 161 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 MAP3K3Q99759 626 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 NUDT16L1Q9BRJ7 211 aaKnown RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 CBWD1Q9BRT8 395 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 C16orf70Q9BSU1 422 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 PI4K2AQ9BTU6 479 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 NDUFAF3Q9BU61 184 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 TMED9Q9BVK6 235 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 SEC11CQ9BY50 192 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 ABCG5Q9H222 651 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 OR51B6Q9H340 312 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 METTL8Q9H825 291 aaKnown RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 DCAF13Q9NV06 445 aaKnown RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 MED17Q9NVC6 651 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 TEX10Q9NXF1 929 aaPredicted RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 RASL12Q9NYN1 266 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 WSB2Q9NYS7 404 aaPredicted RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 PDP1Q9P0J1 537 aaPredicted RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 NFKBIL1Q9UBC1 381 aaPredicted RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 RPS6KB2Q9UBS0 482 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 POFUT2Q9Y2G5 429 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 GOLT1BQ9Y3E0 138 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 DDX60LQ5H9U9 1706 aaKnown RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 GREB1LQ9C091 1923 aaPredicted RBP2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 SCN11AQ9UI33 1791 aa2.95□□□□□ -1.94
SDCBPP3-201ENST00000419629 TNS2Q63HR2 1409 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 SLX4Q8IY92 1834 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 LOC102723996A0A087X1L8 192 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 A0A096LPI6 279 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 IGHV4-61A0A0C4DH41 118 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 A0A0D9SG52 128 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 A0A1W2PPQ1 181 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 MEX3AA1L020 520 aaKnown RBP2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 NAP1L6A6NFF2 107 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 SNRPGP15A8MWD9 76 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 SEC14L6B5MCN3 397 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 TRDCB7Z8K6 153 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 K7ERQ8 282 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 GPR31O00270 319 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 GAPDHSO14556 408 aaPredicted RBP2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 AZIN1O14977 448 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 ATP6V0E1O15342 81 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 SIGLEC5O15389 551 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 DLEU1O43261 78 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 LRRTM2O43300 516 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 XRCC3O43542 346 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 OR2T1O43869 369 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 GMFGO60234 142 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 CREBL2O60519 120 aaPredicted RBP2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 TSPAN2O60636 221 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 TPST2O60704 377 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 REM1O75628 298 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 ANXA9O76027 345 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 BEST1O76090 585 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 SIX3O95343 332 aaPredicted RBP2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 MOCS2O96007 188 aaPredicted RBP2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 IGHV4-59P01825 116 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 FABP3P05413 133 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 FHP07954 510 aa2.94□□□□□ -1.94
SDCBPP3-201ENST00000419629 ANXA5P08758 320 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms