RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 SHPKQ9UHJ6 478 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 LHX6Q9UPM6 363 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 PCDHGA9Q9Y5G4 932 aaKnown RBP11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 GABARAPH6UMI1 98 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 TRIM3O75382 744 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 GLCEO94923 617 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 CD2P06729 351 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 SULT1A3P0DMM9 295 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 SULT1A4P0DMN0 295 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 CT45A8P0DMV1 189 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 CT45A9P0DMV2 189 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 SLC6A9P48067 706 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 SNU13P55769 128 aaKnown RBP11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 SEC61A1P61619 476 aaKnown RBP11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 HLXQ14774 488 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 ACKR1Q16570 336 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 CT45A2Q5DJT8 189 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 STEAP1BQ6NZ63 245 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 LRRTM1Q86UE6 522 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 ZC3HAV1LQ96H79 300 aaKnown RBP11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 NPAS1Q99742 590 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 USB1Q9BQ65 265 aaKnown RBP11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 ST6GALNAC5Q9BVH7 336 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 ZNF416Q9BWM5 594 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 SLC6A15Q9H2J7 730 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 POMT2Q9UKY4 750 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 CPED1A4D0V7 1026 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 SFTPBP07988 381 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 SLC35E2P0CK97 266 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 CAPZA1P52907 286 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 POU3F1Q03052 451 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 ARFRP1Q13795 201 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 GPR139Q6DWJ6 353 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 LANCL3Q6ZV70 420 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 ZNF248Q8NDW4 579 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 SLC25A28Q96A46 364 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 KLHDC7BQ96G42 594 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 HEXA-AS1Q9H8Q6 139 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 PRODH2Q9UF12 536 aa11.95□□□□□ -0.5
TNFRSF8-203ENST00000417814 IGHV5-51A0A0C4DH38 117 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 ZNF264O43296 627 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 FADS1O60427 444 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 F10P00742 488 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 CSNK1EP49674 416 aaKnown RBP11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 INPP5JQ15735 1006 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 RPL13AP3Q6NVV1 102 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 PDZD9Q8IXQ8 264 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 OR10Z1Q8NGY1 313 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 ANKRD19PQ9H560 264 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 ZNF768Q9H5H4 540 aaKnown RBP11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 CHMP1AQ9HD42 196 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 CD207Q9UJ71 328 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 TMEM269A0A1B0GVZ9 245 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 RHPN2P1A8MT19 583 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 PLRG1O43660 514 aaKnown RBP11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 MPIG6BO95866 241 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 PPP3CBP16298 524 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 CDAP32320 146 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 KIR2DL1P43626 348 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 LBX1P52954 281 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 MFGE8Q08431 387 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 ZNF417Q8TAU3 575 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 ROBO4Q8WZ75 1007 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 RADILQ96JH8 1075 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 ZNF587Q96SQ5 575 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 MAFFQ9ULX9 164 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 NBASA2RRP1 2371 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 FRMPD3Q5JV73 1810 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 hCG_1807616A0A1W2PRN6 198 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 BET1O15155 118 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 SUSD5O60279 629 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 PRAMEF2O60811 474 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 FBXO24O75426 580 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 CTLA4P16410 223 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 GNB3P16520 340 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 GPR85P60893 370 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 DPY19L2P2Q6ZN68 376 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 C8orf44Q96CB5 159 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 TSPAN32Q96QS1 320 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 PCNX3Q9H6A9 2034 aa11.94□□□□□ -0.5
TNFRSF8-203ENST00000417814 C7orf66A4D0T2 115 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 MCRIP1C9JLW8 97 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 ADAM10O14672 748 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 SC5DO75845 299 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 RRASP10301 218 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 CBR1P16152 277 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 FCARP24071 287 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 NPY4RP50391 375 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 DLX5P56178 289 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 FOXK1P85037 733 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 POU4F2Q12837 409 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 ZNF169Q14929 603 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 MESTQ5EB52 335 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 RNLSQ5VYX0 342 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 DCXRQ7Z4W1 244 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 C19orf47Q8N9M1 422 aaKnown RBP11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 OR10H5Q8NGA6 315 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 OR14A16Q8NHC5 309 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 MARVELD3Q96A59 401 aa11.93□□□□□ -0.5
TNFRSF8-203ENST00000417814 KLHL15Q96M94 604 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms