RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 DRG1Q9Y295 367 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 TPRKBQ9Y3C4 175 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 FAM215AQ9Y5M1 114 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 DOCK10Q96BY6 2186 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 CPAMD8Q8IZJ3 1885 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 IGLV3-10A0A075B6K4 115 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 IQCMA0A1B0GVH7 501 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SERTM2A0A1B0GWG4 89 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 A0A1W2PP18 115 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC5A10A0PJK1 596 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 TRAPPC13A5PLN9 417 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 OR52A4PA6NMU1 304 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 WASHC1A8K0Z3 465 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 BBIP1A8MTZ0 92 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 TMEM238C9JI98 176 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC1A7O00341 560 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF195O14628 629 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SIGLEC5O15389 551 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ATG12O94817 140 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 GLCEO94923 617 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ADAP00813 363 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 TK1P04183 234 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SP1P08047 785 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SNRNP70P08621 437 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 THRBP10828 461 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 HSD17B1P14061 328 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 TSPAN8P19075 237 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 BMP5P22003 454 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 GTF2E2P29084 291 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SERPINA4P29622 427 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 MPIP34949 423 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 AHRP35869 848 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ARR3P36575 388 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 MNDAP41218 407 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 GABRB2P47870 512 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 GCLMP48507 274 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SELENOPP49908 381 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 RPS20P60866 119 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 BLOC1S1P78537 153 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 VLDLRP98155 873 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 FKBP3Q00688 224 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 MS4A2Q01362 244 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 DPTQ07507 201 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 NAE1Q13564 534 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 IHHQ14623 411 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 LARS2Q15031 903 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 MPPED2Q15777 294 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC5A12Q1EHB4 618 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 PCGF3Q3KNV8 242 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 AWAT1Q58HT5 328 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 TMEM236Q5W0B7 351 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF585AQ6P3V2 769 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ZCCHC12Q6PEW1 402 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 GDPGP1Q6ZNW5 385 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 COLCA1Q6ZS62 124 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SHISA6Q6ZSJ9 500 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 MAVSQ7Z434 540 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 C10orf107Q8IVU9 208 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 KATNAL2Q8IYT4 538 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 CDK20Q8IZL9 346 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 FAM185AQ8N0U4 392 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 BEST3Q8N1M1 668 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 GPR137CQ8N3F9 429 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 C15orf54Q8N8G6 183 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 POGLUT1Q8NBL1 392 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 CCDC54Q8NEL0 328 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SEMA6DQ8NFY4 1073 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 IL17DQ8TAD2 202 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 C1orf54Q8WWF1 131 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 CYGBQ8WWM9 190 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 IGFBPL1Q8WX77 278 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ASB13Q8WXK3 278 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ROPN1LQ96C74 230 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SPACA9Q96E40 222 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 PDLIM5Q96HC4 596 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 COX14Q96I36 57 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 PPP1R36Q96LQ0 422 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 C3orf30Q96M34 536 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ATP6V0BQ99437 205 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 SPXQ9BT56 116 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ITPAQ9BY32 194 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 EVA1AQ9H8M9 152 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 MRPL47Q9HD33 250 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 C14orf105Q9NVL8 296 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 STOX2Q9P2F5 926 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 OR52A1Q9UKL2 312 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 POMT2Q9UKY4 750 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 KCNS2Q9ULS6 477 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 AAR2Q9Y312 384 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 FBXO7Q9Y3I1 522 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ATG4BQ9Y4P1 393 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 MMACHCQ9Y4U1 282 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 KLK4Q9Y5K2 254 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 V9GYH0 126 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ARID1AO14497 2285 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 ABCA1O95477 2261 aa4.88□□□□□ -1.63
ECHDC1-206ENST00000417628 HYDINQ4G0P3 5121 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 A0A087X0M5 115 aa4.87□□□□□ -1.63
ECHDC1-206ENST00000417628 RNF103-CHMP3A0A140T963 221 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms