RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 SPATA46Q5T0L3 261 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 NHLRC1Q6VVB1 395 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 CPLX4Q7Z7G2 160 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 LRRC17Q8N6Y2 441 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 MCHR2Q969V1 340 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 ZNF347Q96SE7 839 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 ARHGDIGQ99819 225 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 HOPXQ9BPY8 73 aaPredicted RBP13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 ELAC2Q9BQ52 826 aaKnown RBP13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 RSPO3Q9BXY4 272 aaPredicted RBP13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 SLC19A3Q9BZV2 496 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 EFCAB1Q9HAE3 211 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 CYSLTR2Q9NS75 346 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 STX18Q9P2W9 335 aaKnown RBP13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 PCDHGB1Q9Y5G3 927 aa13.25□□□□□ -0.29
SBDSP1-201ENST00000415772 C5orf49A4QMS7 147 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 SNX3O60493 162 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 DEAF1O75398 565 aaPredicted RBP13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 FOXH1O75593 365 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 F13BP05160 661 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 MAKP20794 623 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 LIPAP38571 399 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 UBA52P62987 128 aaKnown RBP13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 CD47Q08722 323 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 SF3A3Q12874 501 aaKnown RBP eCLIP13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 NPTX1Q15818 432 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 PABPC1L2AQ5JQF8 200 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 SHISA2Q6UWI4 295 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 LINC00114Q6XXX2 140 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 HACD2Q6Y1H2 254 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 ALDH16A1Q8IZ83 802 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 OR6T1Q8NGN1 323 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 CMTM5Q96DZ9 223 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 GPA33Q99795 319 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 WFDC6Q9BQY6 131 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 ARMCX1Q9P291 453 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 BAG5Q9UL15 447 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 CACNG2Q9Y698 323 aa13.24□□□□□ -0.29
SBDSP1-201ENST00000415772 FAM220BPB1ANY3 271 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 COX4I1P13073 169 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 ACADSP16219 412 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 PRDX6P30041 224 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 ARHGDIAP52565 204 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 DUSP7Q16829 419 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 RABL3Q5HYI8 236 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 THEM4Q5T1C6 240 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 ARL9Q6T311 187 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 C1orf174Q8IYL3 243 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 IPCEF1Q8WWN9 437 aaPredicted RBP13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 GTF3AQ92664 365 aaKnown RBP13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 ZNF583Q96ND8 569 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 DIRC2Q96SL1 478 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 MRI1Q9BV20 369 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 MYLK2Q9H1R3 596 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 SIAEQ9HAT2 523 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 INIPQ9NRY2 104 aa13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 CGGBP1Q9UFW8 167 aaPredicted RBP13.23□□□□□ -0.29
SBDSP1-201ENST00000415772 DYSFO75923 2080 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 CENPBD1B2RD01 187 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 IGHV1-46P01743 117 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 ASAH2BP0C7U1 165 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 TNFSF4P23510 183 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 TAF11Q15544 211 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 ZER1Q7Z7L7 766 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 KLHL36Q8N4N3 616 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 ZDHHC22Q8N966 263 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 OR2T12Q8NG77 320 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 ABHD4Q8TB40 342 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 SLC25A40Q8TBP6 338 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 NSMAFQ92636 917 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 RCN3Q96D15 328 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 DCLRE1CQ96SD1 692 aaKnown RBP13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 POLR2J2Q9GZM3 115 aaKnown RBP13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 PCDHAC1Q9H158 963 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 POLR2J3Q9H1A7 115 aaKnown RBP13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 ZMAT3Q9HA38 289 aaKnown RBP13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 ELOVL3Q9HB03 270 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 ZDHHC8Q9ULC8 765 aa13.22□□□□□ -0.29
SBDSP1-201ENST00000415772 TIMM8AO60220 97 aaPredicted RBP13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 TRMUO75648 421 aaKnown RBP13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 SLC2A10O95528 541 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 SBK2P0C263 348 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 ZNF32P17041 273 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 FUT1P19526 365 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 CDAP32320 146 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 TAS2R41P59536 307 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 PPP1CBP62140 327 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 GNGT1P63211 74 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 MRPS34P82930 218 aaKnown RBP13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 TNFAIP6P98066 277 aaPredicted RBP13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 RPL18Q07020 188 aaKnown RBP13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 RBM45Q8IUH3 476 aaKnown RBP13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 SPICQ8N5J4 248 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 SIGLECL1Q8N7X8 197 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 GPR32P1Q8NGA4 272 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 KLF14Q8TD94 323 aaPredicted RBP13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 ASB10Q8WXI3 467 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 POP5Q969H6 163 aaKnown RBP13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 TAMM41Q96BW9 452 aa13.21□□□□□ -0.29
SBDSP1-201ENST00000415772 SGTBQ96EQ0 304 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms