RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CYSLTR2Q9NS75 346 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 UBAP1Q9NZ09 502 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 CGGBP1Q9UFW8 167 aaPredicted RBP10.26□□□□□ -0.77
LIMS2-210ENST00000413578 CORO2BQ9UQ03 480 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 ANGPT4Q9Y264 503 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 INSIG2Q9Y5U4 225 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 NPTNQ9Y639 398 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 ISPDA4D126 451 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 NPIPB13A6NJU9 1138 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 NPIPB4C9JG80 1138 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 F5H0A9 414 aaPredicted RBP10.25□□□□□ -0.77
LIMS2-210ENST00000413578 M0QX08 132 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 KPNA4O00629 521 aaPredicted RBP10.25□□□□□ -0.77
LIMS2-210ENST00000413578 SLC2A10O95528 541 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 F13BP05160 661 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 ACADSP16219 412 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 GCH1P30793 250 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 CDAP32320 146 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 RBMXP38159 391 aaKnown RBP10.25□□□□□ -0.77
LIMS2-210ENST00000413578 LIPAP38571 399 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 CRYBA2P53672 197 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 SEC61A1P61619 476 aaKnown RBP10.25□□□□□ -0.77
LIMS2-210ENST00000413578 IL13RA1P78552 427 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 PSG4Q00888 419 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 RPL18Q07020 188 aaKnown RBP10.25□□□□□ -0.77
LIMS2-210ENST00000413578 TMEM155Q4W5P6 130 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 RUNDC3AQ59EK9 446 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 ARMCX4Q5H9R4 360 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 RBMS3Q6XE24 437 aaKnown RBP10.25□□□□□ -0.77
LIMS2-210ENST00000413578 ZNF771Q7L3S4 317 aaPredicted RBP10.25□□□□□ -0.77
LIMS2-210ENST00000413578 NANOGNBQ7Z5D8 188 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 ZNF283Q8N7M2 679 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 ST7LQ8TDW4 575 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 LIPHQ8WWY8 451 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 GEMIN6Q8WXD5 167 aaKnown RBP10.25□□□□□ -0.77
LIMS2-210ENST00000413578 DIRC2Q96SL1 478 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 PARD6BQ9BYG5 372 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 EGLN1Q9GZT9 426 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 WNT5BQ9H1J7 359 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 PATZ1Q9HBE1 687 aaKnown RBP10.25□□□□□ -0.77
LIMS2-210ENST00000413578 CCDC167Q9P0B6 97 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 ZDHHC8Q9ULC8 765 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 SLC7A7Q9UM01 511 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 AUP1Q9Y679 476 aa10.25□□□□□ -0.77
LIMS2-210ENST00000413578 PLSCR5A0PG75 271 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 C5orf49A4QMS7 147 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 EVPLLA8MZ36 301 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 BLOC1S5-TXNDC5H3BN57 136 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 NGFP01138 241 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 IGF2P01344 180 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 CCNOP22674 350 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 SLC6A9P48067 706 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 STX1BP61266 288 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 PPP1CBP62140 327 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 PAX2Q02962 417 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 BAMBIQ13145 260 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 CDK5R2Q13319 367 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 SLC9A3R2Q15599 337 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 FAM27BQ5VT28 67 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 C9orf139Q6ZV77 190 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 CROCCP2Q86T23 111 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 C11orf65Q8NCR3 313 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 AKR7LQ8NHP1 331 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 HDAC2Q92769 488 aaKnown RBP10.24□□□□□ -0.77
LIMS2-210ENST00000413578 DACT3Q96B18 629 aaPredicted RBP10.24□□□□□ -0.77
LIMS2-210ENST00000413578 C7orf26Q96N11 449 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 SIGLEC11Q96RL6 698 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 EBF4Q9BQW3 602 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 OR2H1Q9GZK4 316 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 MSL2Q9HCI7 577 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 TMEM106BQ9NUM4 274 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 EIF3KQ9UBQ5 218 aaKnown RBP10.24□□□□□ -0.77
LIMS2-210ENST00000413578 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.24□□□□□ -0.77
LIMS2-210ENST00000413578 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.24□□□□□ -0.77
LIMS2-210ENST00000413578 RAB21Q9UL25 225 aa10.24□□□□□ -0.77
LIMS2-210ENST00000413578 V9GYY5 206 aaPredicted RBP10.24□□□□□ -0.77
LIMS2-210ENST00000413578 A0A1W2PRG6 482 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 MCIDASD6RGH6 385 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 OR7A10O76100 309 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 TGDSO95455 350 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 MT-ND1P03886 318 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 HIST1H2ABP04908 130 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 PPIAL4GP0DN37 164 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 UMPSP11172 480 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 AQP2P41181 271 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 IDH3AP50213 366 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 GDI2P50395 445 aaKnown RBP10.23□□□□□ -0.77
LIMS2-210ENST00000413578 DAP3P51398 398 aaKnown RBP10.23□□□□□ -0.77
LIMS2-210ENST00000413578 PAX8Q06710 450 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 FMODQ06828 376 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 SELPLGQ14242 412 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 ZMYND11Q15326 602 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 ZMAT1Q5H9K5 638 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 MTX3Q5HYI7 312 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 LEG1Q6P5S2 330 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 SLC25A47Q6Q0C1 308 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 UNQ6126/PRO20091Q6UXV3 157 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 FOXL2NBQ6ZUU3 175 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 HIST3H2AQ7L7L0 130 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 HDDC2Q7Z4H3 204 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms