RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ANXA2P07355 339 aaKnown RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 SPARCP09486 303 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 FTH1P19P0C7X4 201 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 GSTT2BP0CG30 244 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 COX6A1P12074 109 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 IFNGR1P15260 489 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 SPINK2P20155 84 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 DPP4P27487 766 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 SLC35A1P78382 337 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 EIF2B1Q14232 305 aaKnown RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 DCAF12Q5T6F0 453 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 LCN10Q6JVE6 187 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF704Q6ZNC4 412 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 C16orf47Q6ZP98 133 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 GLRX5Q86SX6 157 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF227Q86WZ6 799 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 PLCZ1Q86YW0 608 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 GLB1L2Q8IW92 636 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 UEVLDQ8IX04 471 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 TOMM5Q8N4H5 51 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 SLC26A10Q8NG04 563 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 SMIM4Q8WVI0 70 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 MIB2Q96AX9 1013 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 NTNG2Q96CW9 530 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ABHD1Q96SE0 405 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ANGPTL4Q9BY76 406 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 OR2B2Q9GZK3 357 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 DPAGT1Q9H3H5 408 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 VDAC3Q9Y277 283 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 CHCHD2Q9Y6H1 151 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 A0A1W2PPK0 400 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 GABARAPH6UMI1 98 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 TLX3O43711 291 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 PAHP00439 452 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 UMODP07911 640 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 SNRPBP14678 240 aaKnown RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 FSTP19883 344 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 SSR4P51571 173 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ART1P52961 327 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 POU3F1Q03052 451 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 DBPQ10586 325 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 MYBPHQ13203 477 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ST3GAL2Q16842 350 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 OR5M10Q6IEU7 315 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 IL20RBQ6UXL0 311 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 LRRTM1Q86UE6 522 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 CATSPERDQ86XM0 798 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 GTPBP8Q8N3Z3 284 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF433Q8N7K0 673 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 OR5H6Q8NGV6 325 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 POC1BQ8TC44 478 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 LGALS14Q8TCE9 139 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 SLC7A6Q92536 515 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 TMEM106AQ96A25 262 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ARL5BQ96KC2 179 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 SGCZQ96LD1 299 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 FAM210AQ96ND0 272 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 OXGR1Q96P68 337 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ABHD6Q9BV23 337 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 MMP28Q9H239 520 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 NIPAL2Q9H841 368 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 EMC3Q9P0I2 261 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 COA3Q9Y2R0 106 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 NUBP2Q9Y5Y2 271 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 R4GMQ9 66 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 NSG1A0A0A6YYJ2 146 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 C17orf51A8MQB3 221 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 PSMD9O00233 223 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 TFECO14948 347 aaPredicted RBP12.15□□□□□ -0.46
LIMS1-205ENST00000410093 EEF1E1O43324 174 aaKnown RBP12.15□□□□□ -0.46
LIMS1-205ENST00000410093 EIF1BO60739 113 aaKnown RBP12.15□□□□□ -0.46
LIMS1-205ENST00000410093 VAMP5O95183 116 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 PMS2P2O95744 297 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 IGHG1P01857 330 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 UBCP0CG48 685 aaKnown RBP12.15□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF17P17021 662 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF28P17035 718 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 ACHEP22303 614 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 DSCR4P56555 118 aaPredicted RBP12.15□□□□□ -0.46
LIMS1-205ENST00000410093 GPR176Q14439 515 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 TATDN3Q17R31 274 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 PLA1AQ53H76 456 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 CCDC157Q569K6 752 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 WDR38Q5JTN6 314 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 TMEM244Q5VVB8 128 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 FAM199XQ6PEV8 388 aaPredicted RBP12.15□□□□□ -0.46
LIMS1-205ENST00000410093 PRSS35Q8N3Z0 413 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 OR10H5Q8NGA6 315 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 OR6X1Q8NH79 312 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 PAQR8Q8TEZ7 354 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 YIPF5Q969M3 257 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 HAVCR1Q96D42 359 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 DDA1Q9BW61 102 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 MRPL13Q9BYD1 178 aaKnown RBP12.15□□□□□ -0.46
LIMS1-205ENST00000410093 MOB1AQ9H8S9 216 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 LIN7BQ9HAP6 207 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 STEAP1Q9UHE8 339 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 DHDHQ9UQ10 334 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 HS3ST3B1Q9Y662 390 aa12.15□□□□□ -0.46
LIMS1-205ENST00000410093 GJE1A6NN92 205 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms