RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 GSK3AP49840 483 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 RPS24P62847 133 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ACY1Q03154 408 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 STEAP1BQ6NZ63 245 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 CACUL1Q86Y37 369 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 VRK3Q8IV63 474 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 CCDC116Q8IYX3 515 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 CFAP52Q8N1V2 620 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 C19orf47Q8N9M1 422 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 OR4K17Q8NGC6 315 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 OR51S1Q8NGJ8 323 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 GPX8Q8TED1 209 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 MITD1Q8WV92 249 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 RAB8BQ92930 207 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 WNT2BQ93097 391 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 PELI1Q96FA3 418 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 MED8Q96G25 268 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 MARS2Q96GW9 593 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 TCTN2Q96GX1 697 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 MEGF10Q96KG7 1140 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 STACQ99469 402 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 GABRG3Q99928 467 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 SOX7Q9BT81 388 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 SGPP1Q9BX95 441 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 NMES1Q9C002 83 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 POFUT1Q9H488 388 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 KLHL28Q9NXS3 571 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 DNAJB11Q9UBS4 358 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 GDF2Q9UK05 429 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF281Q9Y2X9 895 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 TPRP12270 2363 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 CACNA1EQ15878 2313 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 EPG5Q9HCE0 2579 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ADAMTS9Q9P2N4 1935 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 URADA6NGE7 173 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 IFITM10A6NMD0 228 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF208O43345 1280 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 TBL1XO60907 577 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ZGLP1P0C6A0 271 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 BMP7P18075 431 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ZBTB25P24278 435 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 IMPA1P29218 277 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 P2RY2P41231 377 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 GPR4P46093 362 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 CX3CR1P49238 355 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 SULT1A2P50226 295 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 GAGE1Q13065 139 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 PPA1Q15181 289 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 TAF13Q15543 124 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 RSPO4Q2I0M5 234 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 TMEM205Q6UW68 189 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 DHRS11Q6UWP2 260 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 HEPN1Q6WQI6 88 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 MAMDC2Q7Z304 686 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 MRPL52Q86TS9 123 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ADIPOR2Q86V24 386 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 SLC25A42Q86VD7 318 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ZDHHC22Q8N966 263 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ACOT4Q8N9L9 421 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 CYB5D2Q8WUJ1 264 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 SLC25A36Q96CQ1 311 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 SPSB2Q99619 263 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 MICU1Q9BPX6 476 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 SULT4A1Q9BR01 284 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 OR52D1Q9H346 318 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 IL21RQ9HBE5 538 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 NOX4Q9NPH5 578 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 RPS10P5Q9NQ39 176 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 UBQLN4Q9NRR5 601 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF223Q9UK11 482 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ADAM29Q9UKF5 820 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 STARD10Q9Y365 291 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 AKAP13Q12802 2813 aa9.64□□□□□ -0.87
NIF3L1-204ENST00000409357 ASCC3Q8N3C0 2202 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 ACACBO00763 2458 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 A0A0A6YYH2 397 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 A0A1B0GW64 132 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 A6NJ64 397 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 GMFGO60234 142 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF432O94892 652 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 FARS2O95363 451 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 CLDN7O95471 211 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 IGSF6O95976 241 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 CRHP06850 196 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 KLK1P06870 262 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 SDHBP21912 280 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 PSMB6P28072 239 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 HTR2CP28335 458 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 ID4P47928 161 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 RHOAP61586 193 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 DHRS2Q13268 280 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 RBM39Q14498 530 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 ELAVL1Q15717 326 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 PLA2G2CQ5R387 149 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 PMS2CLQ68D20 193 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 FAAP20Q6NZ36 180 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 ETV3LQ6ZN32 361 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 LYG2Q86SG7 212 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 DEFB119Q8N690 84 aa9.63□□□□□ -0.87
NIF3L1-204ENST00000409357 ZNF511Q8NB15 262 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms