RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 GPR148Q8TDV2 347 aa8.84□□□□□ -0.99
MSH2-202ENST00000406134 GPR119Q8TDV5 335 aa8.84□□□□□ -0.99
MSH2-202ENST00000406134 SFXN2Q96NB2 322 aa8.84□□□□□ -0.99
MSH2-202ENST00000406134 MNTQ99583 582 aa8.84□□□□□ -0.99
MSH2-202ENST00000406134 OR11A1Q9GZK7 315 aa8.84□□□□□ -0.99
MSH2-202ENST00000406134 UBQLN2Q9UHD9 624 aa8.84□□□□□ -0.99
MSH2-202ENST00000406134 LRP12Q9Y561 859 aa8.84□□□□□ -0.99
MSH2-202ENST00000406134 LOC390937A0A1W2PQ73 354 aa8.84□□□□□ -1
MSH2-202ENST00000406134 MFSD2BA6NFX1 497 aa8.84□□□□□ -1
MSH2-202ENST00000406134 MS4A18H0YCH9 400 aa8.84□□□□□ -1
MSH2-202ENST00000406134 SLC17A2O00624 439 aa8.84□□□□□ -1
MSH2-202ENST00000406134 MELTFP08582 738 aa8.84□□□□□ -1
MSH2-202ENST00000406134 RORAP35398 523 aa8.84□□□□□ -1
MSH2-202ENST00000406134 RPL27P61353 136 aaKnown RBP8.84□□□□□ -1
MSH2-202ENST00000406134 MS4A18Q3C1V0 323 aa8.84□□□□□ -1
MSH2-202ENST00000406134 TMEM225Q6GV28 225 aa8.84□□□□□ -1
MSH2-202ENST00000406134 OGFOD3Q6PK18 319 aa8.84□□□□□ -1
MSH2-202ENST00000406134 C16orf47Q6ZP98 133 aaPredicted RBP8.84□□□□□ -1
MSH2-202ENST00000406134 LANCL3Q6ZV70 420 aa8.84□□□□□ -1
MSH2-202ENST00000406134 TTLL10Q6ZVT0 673 aa8.84□□□□□ -1
MSH2-202ENST00000406134 LUZP2Q86TE4 346 aa8.84□□□□□ -1
MSH2-202ENST00000406134 ZNF679Q8IYX0 411 aa8.84□□□□□ -1
MSH2-202ENST00000406134 ST7LQ8TDW4 575 aa8.84□□□□□ -1
MSH2-202ENST00000406134 DVL3Q92997 716 aaPredicted RBP8.84□□□□□ -1
MSH2-202ENST00000406134 CCDC120Q96HB5 630 aa8.84□□□□□ -1
MSH2-202ENST00000406134 TPSD1Q9BZJ3 242 aa8.84□□□□□ -1
MSH2-202ENST00000406134 B3GNT4Q9C0J1 378 aa8.84□□□□□ -1
MSH2-202ENST00000406134 DIABLOQ9NR28 239 aa8.84□□□□□ -1
MSH2-202ENST00000406134 SLC22A11Q9NSA0 550 aa8.84□□□□□ -1
MSH2-202ENST00000406134 IKZF2Q9UKS7 526 aa8.84□□□□□ -1
MSH2-202ENST00000406134 MMACHCQ9Y4U1 282 aa8.84□□□□□ -1
MSH2-202ENST00000406134 CDC40O60508 579 aaKnown RBP eCLIP8.83□□□□□ -1
MSH2-202ENST00000406134 CD3DP04234 171 aa8.83□□□□□ -1
MSH2-202ENST00000406134 HIST1H2ABP04908 130 aa8.83□□□□□ -1
MSH2-202ENST00000406134 FSTP19883 344 aa8.83□□□□□ -1
MSH2-202ENST00000406134 AP3S2P59780 193 aa8.83□□□□□ -1
MSH2-202ENST00000406134 RASGEF1BQ0VAM2 473 aa8.83□□□□□ -1
MSH2-202ENST00000406134 DEFB133Q30KQ1 61 aa8.83□□□□□ -1
MSH2-202ENST00000406134 RGS7BPQ6MZT1 257 aaPredicted RBP8.83□□□□□ -1
MSH2-202ENST00000406134 POMZP3Q6PJE2 187 aa8.83□□□□□ -1
MSH2-202ENST00000406134 CORO6Q6QEF8 472 aa8.83□□□□□ -1
MSH2-202ENST00000406134 HIST3H2AQ7L7L0 130 aa8.83□□□□□ -1
MSH2-202ENST00000406134 HIST1H2ACQ93077 130 aa8.83□□□□□ -1
MSH2-202ENST00000406134 OMA1Q96E52 524 aa8.83□□□□□ -1
MSH2-202ENST00000406134 SEH1LQ96EE3 360 aa8.83□□□□□ -1
MSH2-202ENST00000406134 MRPL48Q96GC5 212 aaKnown RBP8.83□□□□□ -1
MSH2-202ENST00000406134 PELOQ9BRX2 385 aaKnown RBP8.83□□□□□ -1
MSH2-202ENST00000406134 AKAP7Q9P0M2 348 aaPredicted RBP8.83□□□□□ -1
MSH2-202ENST00000406134 SEC16AO15027 2179 aa8.83□□□□□ -1
MSH2-202ENST00000406134 HCRTR2O43614 444 aa8.83□□□□□ -1
MSH2-202ENST00000406134 NMBP08949 121 aa8.83□□□□□ -1
MSH2-202ENST00000406134 GIMD1P0DJR0 217 aa8.83□□□□□ -1
MSH2-202ENST00000406134 OC90Q02509 493 aaPredicted RBP8.83□□□□□ -1
MSH2-202ENST00000406134 HLXQ14774 488 aaPredicted RBP8.83□□□□□ -1
MSH2-202ENST00000406134 IDO2Q6ZQW0 420 aa8.83□□□□□ -1
MSH2-202ENST00000406134 RNF144BQ7Z419 303 aa8.83□□□□□ -1
MSH2-202ENST00000406134 ZNF227Q86WZ6 799 aa8.83□□□□□ -1
MSH2-202ENST00000406134 GALNT16Q8N428 558 aa8.83□□□□□ -1
MSH2-202ENST00000406134 ZNF676Q8N7Q3 588 aa8.83□□□□□ -1
MSH2-202ENST00000406134 OR51S1Q8NGJ8 323 aa8.83□□□□□ -1
MSH2-202ENST00000406134 RELTQ969Z4 430 aa8.83□□□□□ -1
MSH2-202ENST00000406134 FAM3DQ96BQ1 224 aa8.83□□□□□ -1
MSH2-202ENST00000406134 ELMOD3Q96FG2 381 aa8.83□□□□□ -1
MSH2-202ENST00000406134 ABHD6Q9BV23 337 aa8.83□□□□□ -1
MSH2-202ENST00000406134 TAS2R4Q9NYW5 299 aa8.83□□□□□ -1
MSH2-202ENST00000406134 CELSR3Q9NYQ7 3312 aa8.83□□□□□ -1
MSH2-202ENST00000406134 A0A1W2PPL8 197 aa8.82□□□□□ -1
MSH2-202ENST00000406134 TMEM200CA6NKL6 621 aa8.82□□□□□ -1
MSH2-202ENST00000406134 ANXA2P2A6NMY6 339 aa8.82□□□□□ -1
MSH2-202ENST00000406134 H3BUI4 141 aa8.82□□□□□ -1
MSH2-202ENST00000406134 CREBL2O60519 120 aaPredicted RBP8.82□□□□□ -1
MSH2-202ENST00000406134 ANXA2P07355 339 aaKnown RBP8.82□□□□□ -1
MSH2-202ENST00000406134 FOLR1P15328 257 aa8.82□□□□□ -1
MSH2-202ENST00000406134 CALCRP30988 508 aa8.82□□□□□ -1
MSH2-202ENST00000406134 CCKBRP32239 447 aa8.82□□□□□ -1
MSH2-202ENST00000406134 RBMS2Q15434 407 aaKnown RBP8.82□□□□□ -1
MSH2-202ENST00000406134 ELAVL1Q15717 326 aaKnown RBP8.82□□□□□ -1
MSH2-202ENST00000406134 HYAL4Q2M3T9 481 aa8.82□□□□□ -1
MSH2-202ENST00000406134 SYT13Q7L8C5 426 aa8.82□□□□□ -1
MSH2-202ENST00000406134 ZNF563Q8TA94 476 aa8.82□□□□□ -1
MSH2-202ENST00000406134 LMX1AQ8TE12 382 aa8.82□□□□□ -1
MSH2-202ENST00000406134 SLC41A2Q96JW4 573 aa8.82□□□□□ -1
MSH2-202ENST00000406134 TXNIPQ9H3M7 391 aa8.82□□□□□ -1
MSH2-202ENST00000406134 PDE7BQ9NP56 450 aa8.82□□□□□ -1
MSH2-202ENST00000406134 SEMA5BQ9P283 1151 aa8.82□□□□□ -1
MSH2-202ENST00000406134 SLC5A6Q9Y289 635 aa8.82□□□□□ -1
MSH2-202ENST00000406134 UNC13CQ8NB66 2214 aa8.82□□□□□ -1
MSH2-202ENST00000406134 ALOX12BO75342 701 aa8.82□□□□□ -1
MSH2-202ENST00000406134 ZNF432O94892 652 aa8.82□□□□□ -1
MSH2-202ENST00000406134 RENP00797 406 aa8.82□□□□□ -1
MSH2-202ENST00000406134 ACSM4P0C7M7 580 aa8.82□□□□□ -1
MSH2-202ENST00000406134 FOSL1P15407 271 aa8.82□□□□□ -1
MSH2-202ENST00000406134 SLC6A8P48029 635 aa8.82□□□□□ -1
MSH2-202ENST00000406134 NR0B1P51843 470 aaKnown RBP8.82□□□□□ -1
MSH2-202ENST00000406134 FMODQ06828 376 aa8.82□□□□□ -1
MSH2-202ENST00000406134 NDUFAF7Q7L592 441 aa8.82□□□□□ -1
MSH2-202ENST00000406134 RNF138Q8WVD3 245 aa8.82□□□□□ -1
MSH2-202ENST00000406134 GAL3ST4Q96RP7 486 aa8.82□□□□□ -1
MSH2-202ENST00000406134 GINS4Q9BRT9 223 aa8.82□□□□□ -1
MSH2-202ENST00000406134 GSX2Q9BZM3 304 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms