RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 ZNF433Q8N7K0 673 aaPredicted RBP14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 HMGB4Q8WW32 186 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 GAL3ST3Q96A11 431 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 PNPLA2Q96AD5 504 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 ADAD1Q96M93 576 aaKnown RBP14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 PDCD1LG2Q9BQ51 273 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 SEC11CQ9BY50 192 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 HTTP42858 3142 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 UBE2QL1A1L167 161 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 BDKRB2P30411 391 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 CTHP32929 405 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 THBS4P35443 961 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 NTHL1P78549 312 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 SP3Q02447 781 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 MEX3BQ6ZN04 569 aaKnown RBP14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 C7orf61Q8IZ16 206 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR2L13Q8N349 312 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR6K3Q8NGY3 331 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 ZNF350Q9GZX5 532 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 ZBP1Q9H171 429 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 FOXJ3Q9UPW0 622 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 EDDM13A0A1B0GTR0 161 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 A6NLC8 198 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 ACOT7O00154 380 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 MOSPD3O75425 235 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 F10P00742 488 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 CPT2P23786 658 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 PMELP40967 661 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 P2RX1P51575 399 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 CD81P60033 236 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 SRSF3P84103 164 aaKnown RBP14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 ADAM5Q6NVV9 412 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 SLC35F2Q8IXU6 374 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 TNFRSF13CQ96RJ3 184 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 TMEM27Q9HBJ8 222 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 MEPEQ9NQ76 525 aaPredicted RBP14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 PRSS16Q9NQE7 514 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 SLC27A6Q9Y2P4 619 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 V9GY05 133 aa14.71□□□□□ -0.05
COL4A3BP-204ENST00000405807 MDC1Q14676 2089 aaKnown RBP14.71□□□□□ -0.06
COL4A3BP-204ENST00000405807 PCDH8O95206 1070 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 OPN1LWP04000 364 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 RPS4Y1P22090 263 aaKnown RBP14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 ACHEP22303 614 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 WNT5AP41221 380 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 PNLIPRP2P54317 469 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 PPP2CBP62714 309 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 PPP2CAP67775 309 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 ELAVL3Q14576 367 aaKnown RBP14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 HNRNPA1L2Q32P51 320 aaKnown RBP14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 NHLRC1Q6VVB1 395 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 MFSD9Q8NBP5 474 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 OR52E2Q8NGJ4 325 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 SYNPRQ8TBG9 265 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 GFI1Q99684 422 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 DDA1Q9BW61 102 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 POT1Q9NUX5 634 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 ANKRD10Q9NXR5 420 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 PIN1P1O15428 100 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 CA11O75493 328 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 DCTDP32321 178 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 ODF4Q2M2E3 257 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 OR2L3Q8NG85 312 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 PBX4Q9BYU1 374 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 SEPSECSQ9HD40 501 aaKnown RBP14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 ASF1BQ9NVP2 202 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 OPN4Q9UHM6 478 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 hCG_1809904A0A1W2PP81 198 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 A0A1W2PR64 198 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 A0A1W2PRV1 198 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 ZNF705EA8MWA4 302 aaPredicted RBP14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 TCF21O43680 179 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 NARSO43776 548 aaKnown RBP14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 FARS2O95363 451 aaKnown RBP14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 RAB5AP20339 215 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 NAA10P41227 235 aaPredicted RBP14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 IL10RAQ13651 578 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 FAAP20Q6NZ36 180 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 OR4K14Q8NGD5 310 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 CCDC107Q8WV48 283 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 FAM117AQ9C073 453 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 SLC25A18Q9H1K4 315 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 GSX1Q9H4S2 264 aaPredicted RBP14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 USP36Q9P275 1121 aaKnown RBP14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 SERTAD3Q9UJW9 196 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 ICAM5Q9UMF0 924 aa14.7□□□□□ -0.06
COL4A3BP-204ENST00000405807 GOLGA4Q13439 2230 aaKnown RBP14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 TMEM238C9JI98 176 aa14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 CALCBP10092 127 aa14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 MPGP29372 298 aa14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 AKR1C3P42330 323 aa14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 ART1P52961 327 aa14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 GGTLC2Q14390 218 aa14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 ARSJQ5FYB0 599 aaPredicted RBP14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 DCAF10Q5QP82 559 aa14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 DCST2Q5T1A1 773 aa14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 PWWP2BQ6NUJ5 590 aa14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 NUDT10Q8NFP7 164 aa14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 SP7Q8TDD2 431 aaPredicted RBP14.69□□□□□ -0.06
COL4A3BP-204ENST00000405807 HAVCR1Q96D42 359 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms