RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 UPK1BO75841 260 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 THBS1P07996 1170 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 PGGT1BP53609 377 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 ACTBP60709 375 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 CAMK2BQ13554 666 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 MGLLQ99685 303 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 ZFP57Q9NU63 452 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 WBP1LQ9NX94 342 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 AGAP14A8MT82 685 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 GPR137BO60478 399 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 AKR7A3O95154 331 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 RTL6Q6ICC9 239 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 ZNF417Q8TAU3 575 aa10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 ZNF587Q96SQ5 575 aaPredicted RBP10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 SPAG8Q99932 426 aaPredicted RBP10.08□□□□□ -0.8
CACNA1C-216ENST00000399638 TRBV23-1A0A0A0MS06 115 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 LRIT2A6NDA9 550 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 ZNF593O00488 134 aaPredicted RBP10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 MS4A2Q01362 244 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 EIF3IQ13347 325 aaKnown RBP10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 LINC00346Q8IVM7 164 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 OR4C5Q8NGB2 326 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 OR2I1PQ8NGU4 316 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 CNIH3Q8TBE1 160 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 ZNF778Q96MU6 729 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 HRH3Q9Y5N1 445 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 CSNK1G3Q9Y6M4 447 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 TRAV39A0A0B4J263 110 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 HIST1H1TP22492 207 aaPredicted RBP10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 MEP1BQ16820 701 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 PRSS48Q7RTY5 328 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 FNDC9Q8TBE3 224 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 ALG12Q9BV10 488 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 OR11A1Q9GZK7 315 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 CHST8Q9H2A9 424 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 CHD4Q14839 1912 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 TSPAN11A1L157 253 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 F6UZH7 168 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 ACOT8O14734 319 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 SH2D1BO14796 132 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 LAMP1P11279 417 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 COX7A1P24310 79 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 C17orf107Q6ZR85 190 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 AMIGO3Q86WK7 504 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 PIGTQ969N2 578 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 L3HYPDHQ96EM0 354 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 VAPAQ9P0L0 249 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 AIFM1O95831 613 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 RAP2BP61225 183 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 ZNF141Q15928 474 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 BLOC1S3Q6QNY0 202 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 Q6ZS52 159 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 PLPP6Q8IY26 295 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 MAML2Q8IZL2 1156 aaPredicted RBP10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 WDTC1Q8N5D0 677 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 NPEPL1Q8NDH3 523 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 OR5B3Q8NH48 314 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 ARL11Q969Q4 196 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 LGALS12Q96DT0 336 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 HMGN2P05204 90 aaKnown RBP10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 GLULP15104 373 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 OXA1LQ15070 435 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 OR2B11Q5JQS5 317 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 ADAMTS16Q8TE57 1224 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 ELMOD3Q96FG2 381 aa10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 ZNF142P52746 1687 aaPredicted RBP10.07□□□□□ -0.8
CACNA1C-216ENST00000399638 MROH6A6NGR9 719 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 ZFP92A6NM28 416 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 F5H5P2 479 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 SDC1P18827 310 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 PRLHRP49683 370 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 NAAAQ02083 359 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 SLC10A2Q12908 348 aaPredicted RBP10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 SUMF1Q8NBK3 374 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 SLC35A4Q96G79 324 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 SELENOIQ9C0D9 397 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 R3HDMLQ9H3Y0 253 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 ANKRD19PQ9H560 264 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 DNAJC15Q9Y5T4 150 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 MBTPS2O43462 519 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 OR13C7P0DN81 318 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 TCTN1Q2MV58 587 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 ENTPD8Q5MY95 495 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 ZNF626Q68DY1 528 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 OR7G3Q8NG95 312 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 CALCBP10092 127 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 CCBE1Q6UXH8 406 aaPredicted RBP10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 TSPYL5Q86VY4 417 aaPredicted RBP10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 TGIF2LYQ8IUE0 185 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 OR2Z1Q8NG97 314 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 ALG8Q9BVK2 526 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 SLC25A31Q9H0C2 315 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 WNT16Q9UBV4 365 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 OR5V1Q9UGF6 321 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 HHLA2Q9UM44 414 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 CLDN24A6NM45 220 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 H7C2G1 150 aa10.06□□□□□ -0.8
CACNA1C-216ENST00000399638 OPN1MWP04001 364 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms