RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 FAPQ12884 760 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 TBCEQ15813 527 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-204ENST00000397443 C10orf128Q5T292 105 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 OR2A2Q6IF42 318 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 CORO6Q6QEF8 472 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 THEM6Q8WUY1 208 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 RORBQ92753 470 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 TMIGD2Q96BF3 282 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 TP63Q9H3D4 680 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-204ENST00000397443 GP6Q9HCN6 339 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 LAMP5Q9UJQ1 280 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 POLR1DQ9Y2S0 133 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 MBD3L4A6NDZ8 208 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-204ENST00000397443 MBD3L3A6NE82 208 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-204ENST00000397443 MBD3L5A6NJ08 208 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-204ENST00000397443 OR2T7P0C7T2 308 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 ENTPD1P49961 510 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 FOXG1P55316 489 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-204ENST00000397443 ACTC1P68032 377 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 ACTA1P68133 377 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 DOC2BQ14184 412 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 SPATC1Q76KD6 591 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 LRRC18Q8N456 261 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 OR2T27Q8NH04 317 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 MBD3L2Q8NHZ7 208 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-204ENST00000397443 GATAD2BQ8WXI9 593 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF649Q9BS31 505 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 MND1Q9BWT6 205 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 CDADC1Q9BWV3 514 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 MARCH7Q9H992 704 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 KIR2DL2P43627 348 aaPredicted RBP18.67■□□□□ 0.58
CPNE1-204ENST00000397443 RPL5P46777 297 aaKnown RBP18.67■□□□□ 0.58
CPNE1-204ENST00000397443 NCCRP1Q6ZVX7 275 aaPredicted RBP18.67■□□□□ 0.58
CPNE1-204ENST00000397443 SATL1Q86VE3 508 aa18.67■□□□□ 0.58
CPNE1-204ENST00000397443 CDC20BQ86Y33 519 aa18.67■□□□□ 0.58
CPNE1-204ENST00000397443 NANOGP1Q8N7R0 232 aa18.67■□□□□ 0.58
CPNE1-204ENST00000397443 NAXEQ8NCW5 288 aa18.67■□□□□ 0.58
CPNE1-204ENST00000397443 ISG20L2Q9H9L3 353 aaKnown RBP18.67■□□□□ 0.58
CPNE1-204ENST00000397443 POLE4Q9NR33 117 aa18.67■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF835Q9Y2P0 537 aa18.67■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF587BE7ETH6 402 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF670-ZNF695F2Z2N8 137 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 IL2RAP01589 272 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 TMIGD3P0DMS9 266 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-204ENST00000397443 B4GALT1P15291 398 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 KLHL36Q8N4N3 616 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 TTYH2Q9BSA4 534 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 PCNX1Q96RV3 2341 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 PRR32B1ATL7 298 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF133P52736 654 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-204ENST00000397443 PMPCAQ10713 525 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 EIF2B1Q14232 305 aaKnown RBP18.66■□□□□ 0.58
CPNE1-204ENST00000397443 GALEQ14376 348 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 GUSBP1Q15486 140 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 TP53I3Q53FA7 332 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 RIPPLY2Q5TAB7 128 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 OTOSQ8NHW6 89 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 SNX33Q8WV41 574 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 SPRYD4Q8WW59 207 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-204ENST00000397443 AMELYQ99218 206 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 YIPF3Q9GZM5 350 aa18.66■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF99A8MXY4 864 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-204ENST00000397443 J3QLW9 94 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 GLI4P10075 376 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF19P17023 458 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 OR3A2P47893 321 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 RAB39AQ14964 217 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 MUL1Q969V5 352 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 C4orf36Q96KX1 117 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 FOXB1Q99853 325 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 SH3GL3Q99963 347 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 LINC00470Q9BZP3 86 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 NELFAQ9H3P2 528 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 ASH2LQ9UBL3 628 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 POLEQ07864 2286 aa18.65■□□□□ 0.58
CPNE1-204ENST00000397443 TRGV8A0A0C4DH27 118 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 PNMA8CA0A1B0GUJ8 204 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 OR6C65A6NJZ3 312 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 HRGP04196 525 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 MSR1P21757 451 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 WNT4P56705 351 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 OR12D2P58182 307 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 SPHARQ15513 63 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF322Q6U7Q0 402 aaPredicted RBP18.64■□□□□ 0.58
CPNE1-204ENST00000397443 PLEKHG7Q6ZR37 379 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 DCXRQ7Z4W1 244 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 BTLAQ7Z6A9 289 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 ATCAYQ86WG3 371 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 NABP1Q96AH0 204 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 WBP1Q96G27 269 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF416Q9BWM5 594 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 JAM3Q9BX67 310 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 INPP5EQ9NRR6 644 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 TMEM38BQ9NVV0 291 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 GNG8Q9UK08 70 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 IKZF2Q9UKS7 526 aa18.64■□□□□ 0.58
CPNE1-204ENST00000397443 LSM2Q9Y333 95 aaKnown RBP18.64■□□□□ 0.58
CPNE1-204ENST00000397443 NCOA6Q14686 2063 aaPredicted RBP18.64■□□□□ 0.58
CPNE1-204ENST00000397443 TMEM129A0AVI4 362 aa18.64■□□□□ 0.57
CPNE1-204ENST00000397443 TNFSF13O75888 250 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms