RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TMEM27Q9HBJ8 222 aa7.89□□□□□ -1.15
NEDD9-203ENST00000397378 TMEM106BQ9NUM4 274 aa7.89□□□□□ -1.15
NEDD9-203ENST00000397378 DCAF16Q9NXF7 216 aa7.89□□□□□ -1.15
NEDD9-203ENST00000397378 EIF3KQ9UBQ5 218 aaKnown RBP7.89□□□□□ -1.15
NEDD9-203ENST00000397378 OR5V1Q9UGF6 321 aa7.89□□□□□ -1.15
NEDD9-203ENST00000397378 TRIM33Q9UPN9 1127 aa7.89□□□□□ -1.15
NEDD9-203ENST00000397378 LRCH1Q9Y2L9 728 aa7.89□□□□□ -1.15
NEDD9-203ENST00000397378 H0YL77 283 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 SDHDO14521 159 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 BIRC5O15392 142 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 ICMTO60725 284 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 OR6A2O95222 327 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 PPP1R3DO95685 299 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 NUDT7P0C024 238 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 STOMP27105 288 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 WNT5AP41221 380 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 SLC1A6P48664 564 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 ZNF84P51523 738 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 BPIFB3P59826 476 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 RPL15P61313 204 aaKnown RBP7.88□□□□□ -1.15
NEDD9-203ENST00000397378 BTG1P62324 171 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 TNFAIP6P98066 277 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-203ENST00000397378 HSF2Q03933 536 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 CDK5R2Q13319 367 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 OR1Q1Q15612 314 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 HIST3H3Q16695 136 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 GTDC1Q4AE62 458 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 DEFB121Q5J5C9 76 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 PABPC1L2AQ5JQF8 200 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 SPATA46Q5T0L3 261 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 LRRN1Q6UXK5 716 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 LINC00114Q6XXX2 140 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 BRD3OSQ6XYD6 125 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 TMEM86BQ8N661 226 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 C10orf53Q8N6V4 93 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 SLC25A40Q8TBP6 338 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 MAL2Q969L2 176 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 DACT3Q96B18 629 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-203ENST00000397378 PHF21AQ96BD5 680 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 ITCHQ96J02 903 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 SAMD8Q96LT4 415 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 SIGLEC11Q96RL6 698 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 DCLRE1CQ96SD1 692 aaKnown RBP7.88□□□□□ -1.15
NEDD9-203ENST00000397378 SPATA5L1Q9BVQ7 753 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 OR2J1Q9GZK6 312 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 RAD21L1Q9H4I0 556 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 RMND5AQ9H871 391 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 EVA1AQ9H8M9 152 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 TAS2R5Q9NYW4 299 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 PCDHGB5Q9Y5G0 923 aa7.88□□□□□ -1.15
NEDD9-203ENST00000397378 LOC100509620A0A075B734 347 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 WDR91A4D1P6 747 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 CENPBD1B2RD01 187 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 C5orf58C9J3I9 102 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 RNF13O43567 381 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 TPST1O60507 370 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 TPST2O60704 377 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 IGHG1P01857 330 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 WNT2P09544 360 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 TNFRSF1AP19438 455 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 CCNOP22674 350 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 MDH2P40926 338 aaKnown RBP7.87□□□□□ -1.15
NEDD9-203ENST00000397378 ZNF133P52736 654 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-203ENST00000397378 CDH12P55289 794 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 RGS8P57771 180 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-203ENST00000397378 PPP1CBP62140 327 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 MELKQ14680 651 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 ZMYND11Q15326 602 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 MTX3Q5HYI7 312 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 C10orf128Q5T292 105 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 BTNL3Q6UXE8 466 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 Q6YL49 198 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 ZER1Q7Z7L7 766 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 KRT73Q86Y46 540 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 MUC20Q8N307 709 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-203ENST00000397378 LRRC18Q8N456 261 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 HIPK4Q8NE63 616 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 OR10S1Q8NGN2 331 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 RAB40AQ8WXH6 277 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.87□□□□□ -1.15
NEDD9-203ENST00000397378 DYRK2Q92630 601 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 MCHR2Q969V1 340 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 FAM210AQ96ND0 272 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 SEPHS2Q99611 448 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 ARHGDIGQ99819 225 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 SSBP3Q9BWW4 388 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-203ENST00000397378 MRPL13Q9BYD1 178 aaKnown RBP7.87□□□□□ -1.15
NEDD9-203ENST00000397378 ROPN1BQ9BZX4 212 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-203ENST00000397378 KCNN2Q9H2S1 579 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 NANOGQ9H9S0 305 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 ROPN1Q9HAT0 212 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-203ENST00000397378 SIAEQ9HAT2 523 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 MSL2Q9HCI7 577 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 NOX4Q9NPH5 578 aa7.87□□□□□ -1.15
NEDD9-203ENST00000397378 NOTCH3Q9UM47 2321 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 IGHV2-70DA0A0C4DH43 119 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 C5orf49A4QMS7 147 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 PRORSD1PA6NEY8 169 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 CEACAM18A8MTB9 384 aa7.86□□□□□ -1.15
NEDD9-203ENST00000397378 CLIC1O00299 241 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms