RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ST7LQ8TDW4 575 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 MCHR2Q969V1 340 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 TRIM44Q96DX7 344 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-208ENST00000397204 SPDL1Q96EA4 605 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 MPP4Q96JB8 637 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 DIRC2Q96SL1 478 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 SEPHS2Q99611 448 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 ARHGDIGQ99819 225 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 GAL3ST1Q99999 423 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 MRPL13Q9BYD1 178 aaKnown RBP7.42□□□□□ -1.22
CAPN3-208ENST00000397204 PARD6BQ9BYG5 372 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 OR51B6Q9H340 312 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 ZMAT3Q9HA38 289 aaKnown RBP7.42□□□□□ -1.22
CAPN3-208ENST00000397204 EIF3KQ9UBQ5 218 aaKnown RBP7.42□□□□□ -1.22
CAPN3-208ENST00000397204 KLHL21Q9UJP4 597 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF229Q9UJW7 825 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 ZDHHC8Q9ULC8 765 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 POLR3KQ9Y2Y1 108 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-208ENST00000397204 CACNG2Q9Y698 323 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 TRBV5-3A0A0A0MS03 114 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 A0A1W2PRG6 482 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 TRAPPC13A5PLN9 417 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 M0QX08 132 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF500O60304 480 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-208ENST00000397204 FBXO24O75426 580 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 FOXH1O75593 365 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 LYPD3O95274 346 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 IGHV1-46P01743 117 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 F13BP05160 661 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 STOMP27105 288 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 AQP1P29972 269 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 ATP4BP51164 291 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF133P52736 654 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-208ENST00000397204 LCN2P80188 198 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 MRPS34P82930 218 aaKnown RBP7.41□□□□□ -1.22
CAPN3-208ENST00000397204 HSF2Q03933 536 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 PABPC1L2AQ5JQF8 200 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 PAGE3Q5JUK9 113 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 ENTPD8Q5MY95 495 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 THEM4Q5T1C6 240 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 C10orf128Q5T292 105 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 MBNL2Q5VZF2 373 aaKnown RBP7.41□□□□□ -1.22
CAPN3-208ENST00000397204 DOK3Q7L591 496 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 HDDC2Q7Z4H3 204 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 LRRC17Q8N6Y2 441 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 SMYD1Q8NB12 490 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 C11orf65Q8NCR3 313 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 ICA1LQ8NDH6 482 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 KLF14Q8TD94 323 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-208ENST00000397204 C22orf15Q8WYQ4 148 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 POP5Q969H6 163 aaKnown RBP7.41□□□□□ -1.22
CAPN3-208ENST00000397204 LRRC58Q96CX6 371 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 MARS2Q96GW9 593 aaKnown RBP7.41□□□□□ -1.22
CAPN3-208ENST00000397204 POM121L2Q96KW2 1035 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF426Q9BUY5 554 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 SMURF2Q9HAU4 748 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 NKIRAS1Q9NYS0 192 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 PLEK2Q9NYT0 353 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 VAPAQ9P0L0 249 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 STX18Q9P2W9 335 aaKnown RBP7.41□□□□□ -1.22
CAPN3-208ENST00000397204 CGGBP1Q9UFW8 167 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-208ENST00000397204 NUP50Q9UKX7 468 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 PPIAL4AQ9Y536 164 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 USH1CQ9Y6N9 552 aa7.41□□□□□ -1.22
CAPN3-208ENST00000397204 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-208ENST00000397204 C5orf49A4QMS7 147 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 BLOC1S5-TXNDC5H3BN57 136 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 H3BSA7 217 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 M0R3H8 397 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 POLR3GO15318 223 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-208ENST00000397204 SPRY3O43610 288 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 ERLIN1O75477 346 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 THY1P04216 161 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 CD55P08174 381 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 SBK2P0C263 348 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 ACADSP16219 412 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 FUT1P19526 365 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 MAKP20794 623 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 CCNOP22674 350 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 ZFP36P26651 326 aaKnown RBP7.4□□□□□ -1.22
CAPN3-208ENST00000397204 ADMP35318 185 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 GDI2P50395 445 aaKnown RBP7.4□□□□□ -1.22
CAPN3-208ENST00000397204 DAP3P51398 398 aaKnown RBP7.4□□□□□ -1.22
CAPN3-208ENST00000397204 PCBP3P57721 371 aaKnown RBP7.4□□□□□ -1.22
CAPN3-208ENST00000397204 MELKQ14680 651 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 NPTX1Q15818 432 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 PDLIM3Q53GG5 364 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-208ENST00000397204 RUNDC3AQ59EK9 446 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 ZMAT1Q5H9K5 638 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 FAM27BQ5VT28 67 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 DLEU7Q6UYE1 221 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 LRRC18Q8N456 261 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 SIGLECL1Q8N7X8 197 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 OR6T1Q8NGN1 323 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 ADAMTS16Q8TE57 1224 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 GTF3AQ92664 365 aaKnown RBP7.4□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF347Q96SE7 839 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 CCDC28BQ9BUN5 200 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 PCDHAC1Q9H158 963 aa7.4□□□□□ -1.22
CAPN3-208ENST00000397204 IKZF5Q9H5V7 419 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms