RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 GRK5P34947 590 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 AQP2P41181 271 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 MYBPC1Q00872 1141 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 RPL18Q07020 188 aaKnown RBP9□□□□□ -0.97
NEDD8-202ENST00000396828 LGALS3BPQ08380 585 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 SNAPC1Q16533 368 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 MST1LQ2TV78 715 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 CHRFAM7AQ494W8 412 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 C12orf73Q69YU5 71 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 PTCHD4Q6ZW05 846 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 LNX2Q8N448 690 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 IQCF1Q8N6M8 205 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 ADPRHL1Q8NDY3 354 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 OR8D4Q8NGM9 314 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 ZNF417Q8TAU3 575 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 TRUB1Q8WWH5 349 aaKnown RBP9□□□□□ -0.97
NEDD8-202ENST00000396828 RADILQ96JH8 1075 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 ADAD1Q96M93 576 aaKnown RBP9□□□□□ -0.97
NEDD8-202ENST00000396828 ERMAPQ96PL5 475 aaPredicted RBP9□□□□□ -0.97
NEDD8-202ENST00000396828 ZNF385AQ96PM9 386 aaKnown RBP9□□□□□ -0.97
NEDD8-202ENST00000396828 GPX7Q96SL4 187 aaPredicted RBP9□□□□□ -0.97
NEDD8-202ENST00000396828 ZNF587Q96SQ5 575 aaPredicted RBP9□□□□□ -0.97
NEDD8-202ENST00000396828 TVP23BQ9NYZ1 205 aa9□□□□□ -0.97
NEDD8-202ENST00000396828 A0A1W2PRG6 482 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 RIIAD1A6NNX1 92 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 MCIDASD6RGH6 385 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 E9PQ18 207 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 C11orf98E9PRG8 122 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 ATP6V1G2-DDX39BF2Z307 99 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 H7C417 338 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 M0R3G1 203 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 BHLHE40O14503 412 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 GPR171O14626 319 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 IMPA2O14732 288 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 PHF1O43189 567 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-202ENST00000396828 FZD7O75084 574 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 AKR7A3O95154 331 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 PPP1R3DO95685 299 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 CD14P08571 375 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 TSPAN19P0C672 248 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 IGHV4-31P0DP07 118 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 APEHP13798 732 aaKnown RBP8.99□□□□□ -0.97
NEDD8-202ENST00000396828 FXYD6P3P58550 94 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 CTXN1P60606 82 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 ISL1P61371 349 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 LOXL1Q08397 574 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-202ENST00000396828 PUDPQ08623 228 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 ZP4Q12836 540 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 FHL1Q13642 323 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 SLC17A1Q14916 467 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 RAB35Q15286 201 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 HIKESHIQ53FT3 197 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 TMEM225Q6GV28 225 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 ACSM5Q6NUN0 579 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 PAQR6Q6TCH4 344 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 CLEC2AQ6UVW9 174 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 THSD4Q6ZMP0 1018 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 LINGO2Q7L985 606 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 FBXL14Q8N1E6 418 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 TMEM99Q8N816 258 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 ANKK1Q8NFD2 765 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 OR8J1Q8NGP2 316 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 MOSPD2Q8NHP6 518 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 C10orf105Q8TEF2 133 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 Q96MT0 163 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 NRIP3Q9NQ35 241 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 SLC17A5Q9NRA2 495 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 INIPQ9NRY2 104 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 TAS2R5Q9NYW4 299 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 GRHPRQ9UBQ7 328 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 KLHL21Q9UJP4 597 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 ATP23Q9Y6H3 246 aa8.99□□□□□ -0.97
NEDD8-202ENST00000396828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.99□□□□□ -0.972e-8■■■■□ 21.7
NEDD8-202ENST00000396828 SLC35F4A4IF30 521 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 AQP7P3A6NL99 342 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 SNTNA6NMZ2 147 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 ARPC3O15145 178 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 SURF4O15260 269 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 VAMP5O95183 116 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 F13BP05160 661 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 ZNF16P17020 682 aaPredicted RBP8.98□□□□□ -0.97
NEDD8-202ENST00000396828 ZNF3P17036 446 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 PAICSP22234 425 aaKnown RBP8.98□□□□□ -0.97
NEDD8-202ENST00000396828 DAP3P51398 398 aaKnown RBP8.98□□□□□ -0.97
NEDD8-202ENST00000396828 P2RY4P51582 365 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 SNRPGP62308 76 aaKnown RBP8.98□□□□□ -0.97
NEDD8-202ENST00000396828 ERVK-25P63136 954 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 C1DQ13901 141 aaKnown RBP8.98□□□□□ -0.97
NEDD8-202ENST00000396828 MAD2L1BPQ15013 274 aaPredicted RBP8.98□□□□□ -0.97
NEDD8-202ENST00000396828 SWI5Q1ZZU3 235 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 MEDAGQ5VYS4 303 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 GPR139Q6DWJ6 353 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 OR7E24Q6IFN5 339 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 IL17RELQ6ZVW7 336 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 PXKQ7Z7A4 578 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 GPAT4Q86UL3 456 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 IGFN1Q86VF2 1251 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 JAZF1Q86VZ6 243 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 ENTHD1Q8IYW4 607 aa8.98□□□□□ -0.97
NEDD8-202ENST00000396828 ZNF786Q8N393 782 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms