RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 MRI1Q9BV20 369 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 ELOVL3Q9HB03 270 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 TMBIM4Q9HC24 238 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 KLHL21Q9UJP4 597 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 LEF1Q9UJU2 399 aaPredicted RBP14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 NPTNQ9Y639 398 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 USH1CQ9Y6N9 552 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 C5orf49A4QMS7 147 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 M0QX08 132 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 M0R3H8 397 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 IGHMP01871 453 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 RNASE1P07998 156 aaKnown RBP14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 PPIAL4GP0DN37 164 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 TNFRSF1AP19438 455 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 TNFSF4P23510 183 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 MTNR1AP48039 350 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 ARHGDIAP52565 204 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 PCBD1P61457 104 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 GLO1Q04760 184 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 ZNF154Q13106 437 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 BAMBIQ13145 260 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 PAGE3Q5JUK9 113 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 IPCEF1Q8WWN9 437 aaPredicted RBP14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 RABEP2Q9H5N1 569 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 CCDC167Q9P0B6 97 aa14.81□□□□□ -0.04
EXOSC3-202ENST00000396521 TGP01266 2768 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 CPSF4LA6NMK7 179 aaKnown RBP14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 CD247P20963 164 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 RBM34P42696 430 aaKnown RBP14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 MAGOHP61326 146 aaKnown RBP14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 TAF11Q15544 211 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 INTS11Q5TA45 600 aaKnown RBP14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 AGBL2Q5U5Z8 902 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 FAM27BQ5VT28 67 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 ZNF101Q8IZC7 436 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 SLC25A40Q8TBP6 338 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 ASB10Q8WXI3 467 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 WACQ9BTA9 647 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 CCDC28BQ9BUN5 200 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 OR2J1Q9GZK6 312 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 IKZF5Q9H5V7 419 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 UNKLQ9H9P5 680 aaKnown RBP14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 PATZ1Q9HBE1 687 aaKnown RBP14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 INIPQ9NRY2 104 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 IL20RAQ9UHF4 553 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 SLC7A7Q9UM01 511 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 TIMM10BQ9Y5J6 103 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 TRRAPQ9Y4A5 3859 aa14.8□□□□□ -0.04
EXOSC3-202ENST00000396521 A0A1B0GUS0 222 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 HTR3EA5X5Y0 456 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 DNAJC9-AS1A6NH13 148 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 ZSCAN5BA6NJL1 495 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 A8MXK9 166 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 IFNL4K9M1U5 179 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 SURF4O15260 269 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 TRMUO75648 421 aaKnown RBP14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 LYPD3O95274 346 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 IGHV2-70P01814 119 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 MT-ND1P03886 318 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 SBK2P0C263 348 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 ZNF12P17014 697 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 ZNF32P17041 273 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 ZFP36P26651 326 aaKnown RBP14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 WNT5AP41221 380 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 UGT2B15P54855 530 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 PPP1CBP62140 327 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 TNFAIP6P98066 277 aaPredicted RBP14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 DEFA6Q01524 100 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 CYP51A1Q16850 503 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 MTX3Q5HYI7 312 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 LRRC28Q86X40 367 aaPredicted RBP14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 SLC26A7Q8TE54 656 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 LIPHQ8WWY8 451 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 GTF3AQ92664 365 aaKnown RBP14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 ATP6V1G3Q96LB4 118 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 SAMD8Q96LT4 415 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 C7orf26Q96N11 449 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 POLR2J2Q9GZM3 115 aaKnown RBP14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 POLR2J3Q9H1A7 115 aaKnown RBP14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 TMEM106BQ9NUM4 274 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 ZNF69Q9UC07 566 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 INSIG2Q9Y5U4 225 aa14.79□□□□□ -0.04
EXOSC3-202ENST00000396521 LOC100509620A0A075B734 347 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 KPNA4O00629 521 aaPredicted RBP14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 THY1P04216 161 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 FUT1P19526 365 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 GSTM3P21266 225 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 MPV17P39210 176 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 SLC6A9P48067 706 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 PSG4Q00888 419 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 RPL18Q07020 188 aaKnown RBP14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 CDK5R2Q13319 367 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 RUNDC3AQ59EK9 446 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 ARMC4Q5T2S8 1044 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 DLEU7Q6UYE1 221 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 SYT9Q86SS6 491 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 PTOV1Q86YD1 416 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 ZNF283Q8N7M2 679 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 GPR32P1Q8NGA4 272 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 ABHD4Q8TB40 342 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms