RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ACOXLQ9NUZ1 547 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 TMEM38BQ9NVV0 291 aa11.34□□□□□ -0.59
VCPKMT-201ENST00000395859 IGKV1D-42A0A075B6H8 117 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 C3orf84H3BNL1 204 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 TMEM178BH3BS89 294 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 DBIP07108 87 aaKnown RBP11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 CHRNGP07510 517 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 SFTPBP07988 381 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 MMP7P09237 267 aaPredicted RBP11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 IL7RP16871 459 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 UQCRC2P22695 453 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 EFNB2P52799 333 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 TNFAIP6P98066 277 aaPredicted RBP11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 MAD2L1Q13257 205 aaPredicted RBP11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 ZNF718Q3SXZ3 478 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 SPATA46Q5T0L3 261 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 FAM69AQ5T7M9 428 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 OR4F3Q6IEY1 312 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 EPGNQ6UW88 154 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 ZNF836Q6ZNA1 936 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 Q6ZTK2 550 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 SNX32Q86XE0 403 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 ICA1LQ8NDH6 482 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 TMEM54Q969K7 222 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 MAELQ96JY0 434 aaKnown RBP11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 B9D2Q9BPU9 175 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 C20orf27Q9GZN8 174 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 MYLK2Q9H1R3 596 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 TOR3AQ9H497 397 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 RABEP2Q9H5N1 569 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 FN3KRPQ9HA64 309 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 MSL2Q9HCI7 577 aa11.33□□□□□ -0.6
VCPKMT-201ENST00000395859 A0A0U1RQK1 487 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 C22orf46C9J442 243 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 ITM2AO43736 263 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 OR2T1O43869 369 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 ICMTO60725 284 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 PEX11AO75192 247 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 FSTL3O95633 263 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 RPS2P15880 293 aaKnown RBP11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 CALB2P22676 271 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 PRDX6P30041 224 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 CFHR2P36980 270 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 MMP16P51512 607 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 COPZ1P61923 177 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 GNB2P62879 340 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 HPCAP84074 193 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 GNA13Q14344 377 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 C6orf136Q5SQH8 315 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 DHRS7BQ6IAN0 325 aaPredicted RBP11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 LRFN4Q6PJG9 635 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 NET1Q7Z628 596 aaPredicted RBP11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 DPPA2Q7Z7J5 298 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 VRK2Q86Y07 508 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 GALNT4Q8N4A0 578 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 ZNF781Q8N8C0 355 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 FNDC5Q8NAU1 212 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 OR1J2Q8NGS2 313 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 SLC25A40Q8TBP6 338 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 OCSTAMPQ9BR26 566 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 C1orf50Q9BV19 199 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 CDADC1Q9BWV3 514 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 OR2J1Q9GZK6 312 aa11.32□□□□□ -0.6
VCPKMT-201ENST00000395859 A0A087WUJ7 227 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 WI2-2373I1.2A0A1W2PRP0 233 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 TMEM233B4DJY2 109 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 H3BSA7 217 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 P2RY10O00398 339 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 DNAJC8O75937 253 aaPredicted RBP11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 PTHP01270 115 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 GTF2E2P29084 291 aaKnown RBP11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 SMU1Q2TAY7 513 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 RNF220Q5VTB9 566 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 IL23RQ5VWK5 629 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 SLC35E4Q6ICL7 350 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 TMEM53Q6P2H8 277 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 ZNF841Q6ZN19 808 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 Q6ZR03 302 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 CLIP4Q8N3C7 705 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 WFDC9Q8NEX5 89 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 OR8J2Q8NGG1 315 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 OR4A15Q8NGL6 344 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 OR6N1Q8NGY5 312 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 GATAD2BQ8WXI9 593 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 LRTOMTQ8WZ04 291 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 CMTM5Q96DZ9 223 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 POM121L2Q96KW2 1035 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 C3orf30Q96M34 536 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 DPY30Q9C005 99 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 MMADHCQ9H3L0 296 aaPredicted RBP11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 MEAF6Q9HAF1 191 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 MIOXQ9UGB7 285 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 VPREB3Q9UKI3 123 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 FOXJ3Q9UPW0 622 aa11.31□□□□□ -0.6
VCPKMT-201ENST00000395859 IGHV1-69DA0A0B4J2H0 117 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 ADARB2-AS1A8MUL3 147 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 IGHV1-69P01742 117 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 TNFRSF1AP19438 455 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 TGFBR2P37173 567 aa11.3□□□□□ -0.6
VCPKMT-201ENST00000395859 CSNK1A1P48729 337 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms