RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 STK35Q8TDR2 534 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 GPX8Q8TED1 209 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 PPP1R14AQ96A00 147 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 FOXN4Q96NZ1 517 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 OR8B4Q96RC9 309 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 DPYSL5Q9BPU6 564 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 HS3ST3A1Q9Y663 406 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 SPAG17Q6Q759 2223 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 TCRBV16S1A1N1A0A5B0 115 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 PRAMEF26H0Y7S4 382 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 GMFGO60234 142 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 CCR5P51681 352 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 SKP1P63208 163 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 SORDQ00796 357 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 SLC17A1Q14916 467 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 MEP1BQ16820 701 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 C4orf46Q504U0 113 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 CDH26Q8IXH8 852 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 UBALD2Q8IYN6 164 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 SPEM1Q8N4L4 309 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 BVESQ8NE79 360 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 ADAMTS18Q8TE60 1221 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 MMABQ96EY8 250 aaPredicted RBP16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 RTN4RQ9BZR6 473 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 ATG5Q9H1Y0 275 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 C1orf198Q9H425 327 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 CPAMD8Q8IZJ3 1885 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 TECTAO75443 2155 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 TTC28Q96AY4 2481 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 PCNX3Q9H6A9 2034 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 C17orf105B2RV13 164 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 ZNF217O75362 1048 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 AQP8O94778 261 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 ITGB2P05107 769 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 RABIFP47224 123 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 MAZP56270 477 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 ARHGAP40Q5TG30 622 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 C11orf88Q6PI97 169 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 GABRG1Q8N1C3 465 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 DUSP19Q8WTR2 217 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 ADAM19Q9H013 955 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 NXF5Q9H1B4 397 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 SIT1Q9Y3P8 196 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 A0A1W2PPC4 97 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 C11orf98E9PRG8 122 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 PNPP00491 289 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 BGLAPP02818 100 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 RPA2P15927 270 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 NAGAP17050 411 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 MAOBP27338 520 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 MPGP29372 298 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 HSD17B7P56937 341 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 GMFBP60983 142 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 C1QL3Q5VWW1 255 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 STPG2Q8N412 459 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 PLPP7Q8NBV4 271 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 OR5M9Q8NGP3 310 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 SLC25A28Q96A46 364 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 MFFQ9GZY8 342 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 POFUT1Q9H488 388 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 C12orf4Q9NQ89 552 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 SLC17A5Q9NRA2 495 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 EPHA6Q9UF33 1036 aa16.53■□□□□ 0.24
PCDHA1-202ENST00000394633 TRAV14DV4A0A0A6YYC5 116 aa16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 CTRB1P17538 263 aa16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 SSBP1Q04837 148 aaKnown RBP16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 CTRB2Q6GPI1 263 aa16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 NUP54Q7Z3B4 507 aa16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 OR1J4Q8NGS1 313 aa16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 OR6K3Q8NGY3 331 aa16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 THRSPQ92748 146 aa16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 MAP3K3Q99759 626 aa16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 GTF2A1LQ9UNN4 478 aa16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 B9D1Q9UPM9 204 aa16.52■□□□□ 0.24
PCDHA1-202ENST00000394633 CEP192Q8TEP8 1941 aa16.52■□□□□ 0.23
PCDHA1-202ENST00000394633 C17orf51A8MQB3 221 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 B4DGG1 531 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 HLA-DQA2P01906 255 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 SLC37A1P57057 533 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 LY6G6FQ5SQ64 297 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 POMZP3Q6PJE2 187 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 ARSKQ6UWY0 536 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 HSD17B13Q7Z5P4 300 aaPredicted RBP16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 PDZD9Q8IXQ8 264 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 RNF128Q8TEB7 428 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 SEH1LQ96EE3 360 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 ALX4Q9H161 411 aaPredicted RBP16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 RFPL4AA6NLU0 287 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 TTLL8A6PVC2 850 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 RFPL4AL1F8VTS6 287 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 H3BUI4 141 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 K7ESF4 209 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 SPDEFO95238 335 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 RLN2P04090 185 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 MELTFP08582 738 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 CTSEP14091 401 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 PPICP45877 212 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 CENPAP49450 140 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 ZNF117Q03924 483 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms