RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ATOH1Q92858 354 aaPredicted RBP14.64□□□□□ -0.07
PCDH1-203ENST00000394536 MMP25Q9NPA2 562 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 KLHDC2Q9Y2U9 406 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 A0A0B4J2A0 478 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 TEX13DA0A0J9YY54 714 aaPredicted RBP14.63□□□□□ -0.07
PCDH1-203ENST00000394536 ANKRD20A5PA0PJZ0 165 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 CPED1A4D0V7 1026 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 OR5H14A6NHG9 310 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 OR4E1P0C645 316 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 CXCL2P19875 107 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 PVALBP20472 110 aaPredicted RBP14.63□□□□□ -0.07
PCDH1-203ENST00000394536 TNFRSF4P43489 277 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 CAPZA1P52907 286 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 NKAPLQ5M9Q1 402 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 LCN10Q6JVE6 187 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 DCXRQ7Z4W1 244 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 TEX19Q8NA77 164 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 FAM71CQ8NEG0 241 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 NUDCD2Q8WVJ2 157 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 ST8SIA2Q92186 375 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 LCORQ96JN0 433 aaPredicted RBP14.63□□□□□ -0.07
PCDH1-203ENST00000394536 SHPKQ9UHJ6 478 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 MDC1Q14676 2089 aaKnown RBP14.63□□□□□ -0.07
PCDH1-203ENST00000394536 ICOSLGO75144 302 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 GFERP55789 205 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 FAM122CQ6P4D5 195 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 SLC25A38Q96DW6 304 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.63□□□□□ -0.07
PCDH1-203ENST00000394536 ACKR4Q9NPB9 350 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 SDHAF3Q9NRP4 125 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 SNRPGP15A8MWD9 76 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 PRH1P02810 166 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 LPLP06858 475 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 PI3P19957 117 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 SFTPDP35247 375 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 RPS15P62841 145 aaKnown RBP14.63□□□□□ -0.07
PCDH1-203ENST00000394536 CCINQ13939 588 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 FAM199XQ6PEV8 388 aaPredicted RBP14.63□□□□□ -0.07
PCDH1-203ENST00000394536 TMEM88Q6PEY1 159 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 TMEM234Q8WY98 164 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 VSX1Q9NZR4 365 aaPredicted RBP14.63□□□□□ -0.07
PCDH1-203ENST00000394536 SERTAD3Q9UJW9 196 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 B9D1Q9UPM9 204 aa14.63□□□□□ -0.07
PCDH1-203ENST00000394536 ANAPC1Q9H1A4 1944 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 TCF20Q9UGU0 1960 aaKnown RBP14.62□□□□□ -0.07
PCDH1-203ENST00000394536 TMED7-TICAM2A0A0A6YYA0 188 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 H7C417 338 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 S100A9P06702 114 aaKnown RBP14.62□□□□□ -0.07
PCDH1-203ENST00000394536 EN2P19622 333 aaPredicted RBP14.62□□□□□ -0.07
PCDH1-203ENST00000394536 AMY2BP19961 511 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 FBLP22087 321 aaKnown RBP14.62□□□□□ -0.07
PCDH1-203ENST00000394536 CRABP1P29762 137 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 YPEL5P62699 121 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 CHRDL2Q6WN34 429 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 GKN2Q86XP6 184 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 TAAR8Q969N4 342 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 LRRC46Q96FV0 321 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 ZDHHC12Q96GR4 267 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 PELOQ9BRX2 385 aaKnown RBP14.62□□□□□ -0.07
PCDH1-203ENST00000394536 METTL7AQ9H8H3 244 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 MTFP1Q9UDX5 166 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 TMED7Q9Y3B3 224 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF208O43345 1280 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF585AQ6P3V2 769 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 ABHD12BQ7Z5M8 362 aaPredicted RBP14.62□□□□□ -0.07
PCDH1-203ENST00000394536 OR6N1Q8NGY5 312 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 HRH4Q9H3N8 390 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 D6RAR5 112 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 OIP5O43482 229 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 SNAPC5O75971 98 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 IGF2P01344 180 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 HOXB5P09067 269 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 AVPR2P30518 371 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 EMP2P54851 167 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 CLRN1P58418 232 aa14.62□□□□□ -0.07
PCDH1-203ENST00000394536 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.62□□□□□ -0.07
PCDH1-203ENST00000394536 HTTP42858 3142 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 CRTAPO75718 401 aaPredicted RBP14.61□□□□□ -0.07
PCDH1-203ENST00000394536 PMP2P02689 132 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF806P0C7X5 589 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 FAM157BP0CG42 384 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 SLC6A8P48029 635 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 ZP1P60852 638 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 CLVS2Q5SYC1 327 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF626Q68DY1 528 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 OR1J2Q8NGS2 313 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 PHOSPHO2Q8TCD6 241 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 PMM1Q92871 262 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 CMBLQ96DG6 245 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 TRAF4Q9BUZ4 470 aaPredicted RBP14.61□□□□□ -0.07
PCDH1-203ENST00000394536 CUTCQ9NTM9 273 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 PILRAQ9UKJ1 303 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 TNFRSF10CO14798 259 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 MPZL1O95297 269 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 LDOC1O95751 146 aaPredicted RBP14.61□□□□□ -0.07
PCDH1-203ENST00000394536 FAM76BQ5HYJ3 339 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 MANEAQ5SRI9 462 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 OR52W1Q6IF63 320 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 CMIPQ8IY22 773 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 PRRT1Q99946 306 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms