RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 SSR4P51571 173 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 YOD1Q5VVQ6 348 aaPredicted RBP13.61□□□□□ -0.23
CCDC50-201ENST00000392455 GPR26Q8NDV2 337 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 COMMD5Q9GZQ3 224 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 AGPAT4Q9NRZ5 378 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 OR7C2O60412 319 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 OR3A1P47881 315 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 GAB1Q13480 694 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 GTDC1Q4AE62 458 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 EMG1Q92979 244 aaKnown RBP13.61□□□□□ -0.23
CCDC50-201ENST00000392455 RTP3Q9BQQ7 232 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 ZDHHC5Q9C0B5 715 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 OBP2AQ9NY56 170 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 PISDQ9UG56 409 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 SLC5A10A0PJK1 596 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 RFPL4AA6NLU0 287 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 RFPL4AL1F8VTS6 287 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 RRP8O43159 456 aaKnown RBP13.6□□□□□ -0.23
CCDC50-201ENST00000392455 PRSS56P0CW18 603 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 CD1CP29017 333 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 KHSRPQ92945 711 aaKnown RBP eCLIP13.6□□□□□ -0.238e-9■■□□□ 13.5
CCDC50-201ENST00000392455 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 TOX3O15405 576 aaPredicted RBP13.6□□□□□ -0.23
CCDC50-201ENST00000392455 SCG5P05408 212 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 M6PRP20645 277 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 FGF7P21781 194 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 LETMD1Q6P1Q0 360 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 SLC25A43Q8WUT9 341 aaPredicted RBP13.6□□□□□ -0.23
CCDC50-201ENST00000392455 NDRG3Q9UGV2 375 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 GOSR1O95249 250 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 AOAHP28039 575 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 ALKAL2Q6UX46 152 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 GPX8Q8TED1 209 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 NEIL1Q96FI4 390 aaPredicted RBP13.6□□□□□ -0.23
CCDC50-201ENST00000392455 SLC25A18Q9H1K4 315 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 VRTNQ9H8Y1 702 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 SGK494L7N484 410 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 SLC25A6P12236 298 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 CPPED1Q9BRF8 314 aaPredicted RBP13.6□□□□□ -0.23
CCDC50-201ENST00000392455 RANGRFQ9HD47 186 aaPredicted RBP13.6□□□□□ -0.23
CCDC50-201ENST00000392455 CXXC1Q9P0U4 656 aaPredicted RBP13.6□□□□□ -0.23
CCDC50-201ENST00000392455 SLC22A20A6NK97 555 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 PDGFAP04085 211 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 SLC6A11P48066 632 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 GPR119Q8TDV5 335 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 APIPQ96GX9 242 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 GRAMD2BQ96HH9 432 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 SLC29A1Q99808 456 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 URGCP-MRPS24S4R325 110 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 A3GALT2U3KPV4 340 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 FAM186AA6NE01 2351 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 BMP1P13497 986 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 BMP5P22003 454 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 VASH2Q86V25 355 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 CHST14Q8NCH0 376 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 PADI1Q9ULC6 663 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 CSNK1G3Q9Y6M4 447 aa13.6□□□□□ -0.23
CCDC50-201ENST00000392455 ANTXRLA6NF34 631 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 RTP2Q5QGT7 225 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 LYSMD2Q8IV50 215 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 AP5S1Q9NUS5 200 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 CCR7P32248 378 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 DPY19L2P2Q6ZN68 376 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 OR1J1Q8NGS3 322 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 ISG20Q96AZ6 181 aaKnown RBP13.59□□□□□ -0.23
CCDC50-201ENST00000392455 IER2Q9BTL4 223 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 MYADML2A6NDP7 307 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF814B7Z6K7 855 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 POU3F1Q03052 451 aaPredicted RBP13.59□□□□□ -0.23
CCDC50-201ENST00000392455 MANEAQ5SRI9 462 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 SHISA6Q6ZSJ9 500 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 TFAP2CQ92754 450 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 DMRT3Q9NQL9 472 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 OR2J3O76001 311 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 HIST1H1BP16401 226 aaKnown RBP13.59□□□□□ -0.23
CCDC50-201ENST00000392455 LBX1P52954 281 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 SH3BP2P78314 561 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 NHLH1Q02575 133 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 NHLH2Q02577 135 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 NCR3LG1Q68D85 454 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 RANBP10Q6VN20 620 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC50-201ENST00000392455 OR4F15Q8NGB8 312 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 HHIPQ96QV1 700 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 OR52D1Q9H346 318 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 PRAMEF25A6NGN4 478 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 OR2T8A6NH00 312 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 AKR1C3P42330 323 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 SIRPAP78324 504 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 FABP9Q0Z7S8 132 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 PRAMEF5Q5TYX0 476 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 PRAMEF6Q5VXH4 476 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 RPUSD3Q6P087 351 aaKnown RBP13.59□□□□□ -0.23
CCDC50-201ENST00000392455 ABI3BPQ7Z7G0 1075 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 OR5AR1Q8NGP9 310 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 SIGLEC1Q9BZZ2 1709 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 ACOT8O14734 319 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 SOX15O60248 233 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 RAD1O60671 282 aa13.59□□□□□ -0.23
CCDC50-201ENST00000392455 CALCBP10092 127 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms