RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 FAM49BQ9NUQ9 324 aa2.56□□□□□ -2
SNORA40.2-201ENST00000390847 CTSFQ9UBX1 484 aa2.56□□□□□ -2
SNORA40.2-201ENST00000390847 TMED5Q9Y3A6 229 aa2.56□□□□□ -2
SNORA40.2-201ENST00000390847 IGHV5-10-1A0A0J9YXX1 117 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 GLYATL1P3A0A0U1RQE8 302 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 HEATR9A2RTY3 570 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 SMCO2A6NFE2 343 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 FAM47DPA6NHR8 397 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 LRRIQ3A6PVS8 624 aaPredicted RBP2.55□□□□□ -2
SNORA40.2-201ENST00000390847 TCP11X1B4DZS4 312 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 AIM2O14862 343 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 RAB29O14966 203 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 BET1O15155 118 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 CIB2O75838 187 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 SRP72O76094 671 aaKnown RBP2.55□□□□□ -2
SNORA40.2-201ENST00000390847 ADRA2AP08913 450 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 IGHV1-8P0DP01 117 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 TROVE2P10155 538 aaKnown RBP eCLIP2.55□□□□□ -2
SNORA40.2-201ENST00000390847 ZNF250P15622 560 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 ZNF24P17028 368 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 ZNF43P17038 809 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 TCN2P20062 427 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 ARL9Q6T311 187 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 CDR2LQ86X02 465 aaPredicted RBP2.55□□□□□ -2
SNORA40.2-201ENST00000390847 OR56B2PQ8NGI1 322 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 ABHD3Q8WU67 409 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 OR5B12Q96R08 314 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 SLC29A1Q99808 456 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 SPIN2AQ99865 258 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 SPIN2BQ9BPZ2 258 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 CENPKQ9BS16 269 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 RSPO3Q9BXY4 272 aaPredicted RBP2.55□□□□□ -2
SNORA40.2-201ENST00000390847 C12orf10Q9HB07 376 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 SIRT7Q9NRC8 400 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 ZNF355PQ9NSJ1 428 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 ZNRD1Q9P1U0 126 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 IGSF9BQ9UPX0 1349 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 PIKFYVEQ9Y2I7 2098 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 ZNF835Q9Y2P0 537 aa2.55□□□□□ -2
SNORA40.2-201ENST00000390847 COL4A4P53420 1690 aaPredicted RBP2.54□□□□□ -2
SNORA40.2-201ENST00000390847 ZNF705GA8MUZ8 300 aaPredicted RBP2.54□□□□□ -2
SNORA40.2-201ENST00000390847 MRPS12O15235 138 aaKnown RBP2.54□□□□□ -2
SNORA40.2-201ENST00000390847 ZNF286BP0CG31 522 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 RAB3BP20337 219 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 FOXN2P32314 431 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 AQP2P41181 271 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 NSG1P42857 185 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 TMED10P49755 219 aaKnown RBP2.54□□□□□ -2
SNORA40.2-201ENST00000390847 ZNF138P52744 262 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 ESRRGP62508 458 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 ADARB1P78563 741 aaKnown RBP2.54□□□□□ -2
SNORA40.2-201ENST00000390847 MXD1Q05195 221 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 SYCNQ0VAF6 134 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 MOBPQ13875 183 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 SHHQ15465 462 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 FAM78AQ5JUQ0 283 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 SLC8B1Q6J4K2 584 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 PLET1Q6UQ28 207 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 SASS6Q6UVJ0 657 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 RBMXL1Q96E39 390 aaKnown RBP2.54□□□□□ -2
SNORA40.2-201ENST00000390847 LINC00477Q96M19 166 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 ZNF382Q96SR6 550 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 SYNDIG1Q9H7V2 258 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 ZDHHC4Q9NPG8 344 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 GPATCH2LQ9NWQ4 482 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 OPN4Q9UHM6 478 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 ST3GAL6Q9Y274 331 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 TMEM14AQ9Y6G1 99 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 LRP4O75096 1905 aa2.54□□□□□ -2
SNORA40.2-201ENST00000390847 USP47Q96K76 1375 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 SMCO3A2RU48 225 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 RAD51BO15315 384 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 WBP4O75554 376 aaKnown RBP2.53□□□□□ -2
SNORA40.2-201ENST00000390847 FOXH1O75593 365 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 CLPXO76031 633 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 SERPINA5P05154 406 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 CRYGBP07316 175 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 UBTFL6P0CB48 400 aaPredicted RBP2.53□□□□□ -2
SNORA40.2-201ENST00000390847 CCNB1P14635 433 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 F2RP25116 425 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 GDI1P31150 447 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 CEACAM3P40198 252 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 NAA10P41227 235 aaPredicted RBP2.53□□□□□ -2
SNORA40.2-201ENST00000390847 TNNT2P45379 298 aaPredicted RBP2.53□□□□□ -2
SNORA40.2-201ENST00000390847 CX3CR1P49238 355 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 SLC25A11Q02978 314 aaKnown RBP2.53□□□□□ -2
SNORA40.2-201ENST00000390847 PPM1LQ5SGD2 360 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 CEMP1Q6PRD7 247 aaPredicted RBP2.53□□□□□ -2
SNORA40.2-201ENST00000390847 MMAAQ8IVH4 418 aaKnown RBP2.53□□□□□ -2
SNORA40.2-201ENST00000390847 UBALD2Q8IYN6 164 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 FBXL13Q8NEE6 735 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 NOXO1Q8NFA2 376 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 OR10J6PQ8NGY7 276 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 TRMT112Q9UI30 125 aaKnown RBP2.53□□□□□ -2
SNORA40.2-201ENST00000390847 IKBKGQ9Y6K9 419 aa2.53□□□□□ -2
SNORA40.2-201ENST00000390847 MAPK8IP3Q9UPT6 1336 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 C7orf66A4D0T2 115 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 SERPINE3A8MV23 424 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 LSM1O15116 133 aaKnown RBP2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 RBFOX2O43251 390 aaKnown RBP eCLIP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms