RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 OR5V1Q9UGF6 321 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 OPN4Q9UHM6 478 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 RNF215Q9Y6U7 377 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 SIP14410 1827 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 FABP9Q0Z7S8 132 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 PMPCAQ10713 525 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 CCINQ13939 588 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 WBP2NLQ6ICG8 309 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 MDGA2Q7Z553 956 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 LINC00346Q8IVM7 164 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 LINC00518Q8N0U6 118 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 SLC30A7Q8NEW0 376 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 AKR1E2Q96JD6 320 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 RHOFQ9HBH0 211 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 DSPPQ9NZW4 1301 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 MYO16Q9Y6X6 1858 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 MAP1BP46821 2468 aaKnown RBP13.01□□□□□ -0.33
RTF1-201ENST00000389629 P2RY10O00398 339 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 FGF17O60258 216 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 F12P00748 615 aaPredicted RBP13.01□□□□□ -0.33
RTF1-201ENST00000389629 IFNA5P01569 189 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 GLI4P10075 376 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 ATP1B3P54709 279 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 ZNF77Q15935 545 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 Q6ZRG5 221 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 DND1Q8IYX4 353 aaKnown RBP13.01□□□□□ -0.33
RTF1-201ENST00000389629 OR4D6Q8NGJ1 314 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 OR5D14Q8NGL3 314 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 LMF2Q9BU23 707 aaKnown RBP13.01□□□□□ -0.33
RTF1-201ENST00000389629 PRDM7Q9NQW5 492 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 SLC22A13Q9Y226 551 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 ZFPL1O95159 310 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 JMJD7P0C870 316 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 ADGRE4PQ86SQ3 457 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 TAS2R4Q9NYW5 299 aa13.01□□□□□ -0.33
RTF1-201ENST00000389629 SERINC4A6NH21 518 aa13□□□□□ -0.33
RTF1-201ENST00000389629 ZNF705FA8MVS1 300 aaPredicted RBP13□□□□□ -0.33
RTF1-201ENST00000389629 APBB3O95704 486 aa13□□□□□ -0.33
RTF1-201ENST00000389629 OLFM2O95897 454 aa13□□□□□ -0.33
RTF1-201ENST00000389629 ZNF705DP0CH99 300 aaPredicted RBP13□□□□□ -0.33
RTF1-201ENST00000389629 ZNF705BP0CI00 300 aaPredicted RBP13□□□□□ -0.33
RTF1-201ENST00000389629 MAT1AQ00266 395 aaKnown RBP13□□□□□ -0.33
RTF1-201ENST00000389629 C12orf40Q86WS4 652 aa13□□□□□ -0.33
RTF1-201ENST00000389629 SERINC1Q9NRX5 453 aa13□□□□□ -0.33
RTF1-201ENST00000389629 MOKQ9UQ07 419 aa13□□□□□ -0.33
RTF1-201ENST00000389629 SIGLEC7Q9Y286 467 aa13□□□□□ -0.33
RTF1-201ENST00000389629 KPTNQ9Y664 436 aa13□□□□□ -0.33
RTF1-201ENST00000389629 A0A087WV62 115 aa13□□□□□ -0.33
RTF1-201ENST00000389629 A0A1B0GTH9 108 aa13□□□□□ -0.33
RTF1-201ENST00000389629 SMCO3A2RU48 225 aa13□□□□□ -0.33
RTF1-201ENST00000389629 XRCC3O43542 346 aa13□□□□□ -0.33
RTF1-201ENST00000389629 ZNF354AO60765 605 aaPredicted RBP13□□□□□ -0.33
RTF1-201ENST00000389629 HOXD4P09016 255 aaPredicted RBP13□□□□□ -0.33
RTF1-201ENST00000389629 HOXB9P17482 250 aaPredicted RBP13□□□□□ -0.33
RTF1-201ENST00000389629 GABRR1P24046 479 aa13□□□□□ -0.33
RTF1-201ENST00000389629 RNF212Q495C1 297 aa13□□□□□ -0.33
RTF1-201ENST00000389629 HIST2H3PS2Q5TEC6 136 aa13□□□□□ -0.33
RTF1-201ENST00000389629 HGDQ93099 445 aa13□□□□□ -0.33
RTF1-201ENST00000389629 SLCO5A1Q9H2Y9 848 aa13□□□□□ -0.33
RTF1-201ENST00000389629 PLEKHJ1Q9NW61 149 aa13□□□□□ -0.33
RTF1-201ENST00000389629 C17orf105B2RV13 164 aa13□□□□□ -0.33
RTF1-201ENST00000389629 H3BML4 177 aa13□□□□□ -0.33
RTF1-201ENST00000389629 STMND1H3BQB6 276 aa13□□□□□ -0.33
RTF1-201ENST00000389629 HIST2H3AQ71DI3 136 aa13□□□□□ -0.33
RTF1-201ENST00000389629 FJX1Q86VR8 437 aa13□□□□□ -0.33
RTF1-201ENST00000389629 LINC01555Q8NAE3 123 aa13□□□□□ -0.33
RTF1-201ENST00000389629 HAS2Q92819 552 aa13□□□□□ -0.33
RTF1-201ENST00000389629 FGGYQ96C11 551 aa13□□□□□ -0.33
RTF1-201ENST00000389629 RAB3CQ96E17 227 aa13□□□□□ -0.33
RTF1-201ENST00000389629 ENKD1Q9H0I2 346 aa13□□□□□ -0.33
RTF1-201ENST00000389629 IGHA1P01876 353 aa13□□□□□ -0.33
RTF1-201ENST00000389629 ADRA2AP08913 450 aa13□□□□□ -0.33
RTF1-201ENST00000389629 PTAFRP25105 342 aa13□□□□□ -0.33
RTF1-201ENST00000389629 HHEXQ03014 270 aa13□□□□□ -0.33
RTF1-201ENST00000389629 SLC36A2Q495M3 483 aa13□□□□□ -0.33
RTF1-201ENST00000389629 ZNF561Q8N587 486 aa13□□□□□ -0.33
RTF1-201ENST00000389629 ADGRL4Q9HBW9 690 aa13□□□□□ -0.33
RTF1-201ENST00000389629 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13□□□□□ -0.33
RTF1-201ENST00000389629 HMSDA8MTL9 139 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 PRKNO60260 465 aaPredicted RBP12.99□□□□□ -0.33
RTF1-201ENST00000389629 OPN1LWP04000 364 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 ENPP1P22413 925 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 KLF9Q13886 244 aaPredicted RBP12.99□□□□□ -0.33
RTF1-201ENST00000389629 SLC35D3Q5M8T2 416 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 ELFN2Q5R3F8 820 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 ZNF296Q8WUU4 475 aaPredicted RBP12.99□□□□□ -0.33
RTF1-201ENST00000389629 SFT2D1Q8WV19 159 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 HOXB13Q92826 284 aaPredicted RBP12.99□□□□□ -0.33
RTF1-201ENST00000389629 RSRP1Q9BUV0 290 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 A0A087WZY1 265 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 OR5K3A6NET4 321 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 SPP1P10451 314 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 SERPINA2P20848 420 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 CRABP1P29762 137 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 TAGLN2P37802 199 aaKnown RBP12.99□□□□□ -0.33
RTF1-201ENST00000389629 TM4SF4P48230 202 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 HSD11B2P80365 405 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 ACSM1Q08AH1 577 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 GALNT16Q8N428 558 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 WNT2BQ93097 391 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms