RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 PIGWQ7Z7B1 504 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 SLC30A8Q8IWU4 369 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 LRRC17Q8N6Y2 441 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 SYT14Q8NB59 555 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 OR6T1Q8NGN1 323 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 IPCEF1Q8WWN9 437 aaPredicted RBP13.56□□□□□ -0.24
VCX3A-201ENST00000381089 DVL3Q92997 716 aaPredicted RBP13.56□□□□□ -0.24
VCX3A-201ENST00000381089 ZNF347Q96SE7 839 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 NUP50Q9UKX7 468 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 SLC7A7Q9UM01 511 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 PKD1L1Q8TDX9 2849 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 TRBV5-3A0A0A0MS03 114 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 C5orf49A4QMS7 147 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 H3BSA7 217 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 NDUFAB1O14561 156 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 UBOX5O94941 541 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 MMP7P09237 267 aaPredicted RBP13.55□□□□□ -0.24
VCX3A-201ENST00000381089 ACADSP16219 412 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 CD247P20963 164 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 MMP15P51511 669 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 PCBP3P57721 371 aaKnown RBP13.55□□□□□ -0.24
VCX3A-201ENST00000381089 MRPS34P82930 218 aaKnown RBP13.55□□□□□ -0.24
VCX3A-201ENST00000381089 NPTX1Q15818 432 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 DUSP7Q16829 419 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 C10orf128Q5T292 105 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 ZER1Q7Z7L7 766 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 FUNDC1Q8IVP5 155 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 ALDH16A1Q8IZ83 802 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 KLHL36Q8N4N3 616 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 SPICQ8N5J4 248 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 VANGL1Q8TAA9 524 aaPredicted RBP13.55□□□□□ -0.24
VCX3A-201ENST00000381089 SLC26A7Q8TE54 656 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 SLC25A28Q96A46 364 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 MARS2Q96GW9 593 aaKnown RBP13.55□□□□□ -0.24
VCX3A-201ENST00000381089 MRI1Q9BV20 369 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 IKZF5Q9H5V7 419 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 PURGQ9UJV8 347 aaKnown RBP13.55□□□□□ -0.24
VCX3A-201ENST00000381089 NPTNQ9Y639 398 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 AUP1Q9Y679 476 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 CAPN7Q9Y6W3 813 aa13.55□□□□□ -0.24
VCX3A-201ENST00000381089 M0QX08 132 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 CCDC22O60826 627 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 OPN1SWP03999 348 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 ADH4P08319 380 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 TNFSF4P23510 183 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 GUCA1AP43080 201 aaPredicted RBP13.54□□□□□ -0.24
VCX3A-201ENST00000381089 ARHGDIAP52565 204 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 IL13RA1P78552 427 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 KLF10Q13118 480 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 BAMBIQ13145 260 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 ARL9Q6T311 187 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 TREML4Q6UXN2 200 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 PATL1Q86TB9 770 aaKnown RBP13.54□□□□□ -0.24
VCX3A-201ENST00000381089 CCDC197Q8NCU1 140 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 ABHD4Q8TB40 342 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 SLC25A40Q8TBP6 338 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 KLF14Q8TD94 323 aaPredicted RBP13.54□□□□□ -0.24
VCX3A-201ENST00000381089 RASSF5Q8WWW0 418 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 ASB10Q8WXI3 467 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 POM121L2Q96KW2 1035 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 CPPED1Q9BRF8 314 aaPredicted RBP13.54□□□□□ -0.24
VCX3A-201ENST00000381089 MRPL13Q9BYD1 178 aaKnown RBP13.54□□□□□ -0.24
VCX3A-201ENST00000381089 SMURF2Q9HAU4 748 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 ELOVL3Q9HB03 270 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 INIPQ9NRY2 104 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 PLEK2Q9NYT0 353 aa13.54□□□□□ -0.24
VCX3A-201ENST00000381089 LEF1Q9UJU2 399 aaPredicted RBP13.54□□□□□ -0.24
VCX3A-201ENST00000381089 DNAJC9-AS1A6NH13 148 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 ZSCAN5BA6NJL1 495 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 POM121CA8CG34 1229 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 TRMUO75648 421 aaKnown RBP13.53□□□□□ -0.24
VCX3A-201ENST00000381089 IGHMP01871 453 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 F13BP05160 661 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 SBK2P0C263 348 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 ZNF32P17041 273 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 MPV17P39210 176 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 ZNF133P52736 654 aaPredicted RBP13.53□□□□□ -0.24
VCX3A-201ENST00000381089 UGT2B15P54855 530 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 RPL18Q07020 188 aaKnown RBP13.53□□□□□ -0.24
VCX3A-201ENST00000381089 SGCAQ16586 387 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 PDLIM3Q53GG5 364 aaPredicted RBP13.53□□□□□ -0.24
VCX3A-201ENST00000381089 INTS11Q5TA45 600 aaKnown RBP13.53□□□□□ -0.24
VCX3A-201ENST00000381089 ZNF101Q8IZC7 436 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 BCAS4Q8TDM0 211 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 LRRC58Q96CX6 371 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 SEPHS2Q99611 448 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 ZNF426Q9BUY5 554 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 OR2J1Q9GZK6 312 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 PCDHAC1Q9H158 963 aa13.53□□□□□ -0.24
VCX3A-201ENST00000381089 UNKLQ9H9P5 680 aaKnown RBP13.53□□□□□ -0.24
VCX3A-201ENST00000381089 ARHGAP32A7KAX9 2087 aa13.52□□□□□ -0.24
VCX3A-201ENST00000381089 TIMM8AO60220 97 aaPredicted RBP13.52□□□□□ -0.25
VCX3A-201ENST00000381089 LYPD3O95274 346 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 MT-ND1P03886 318 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 THY1P04216 161 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 CD55P08174 381 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 TNFRSF1AP19438 455 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 WNT5AP41221 380 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 PCBD1P61457 104 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms