RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PITPNC1Q9UKF7 332 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 CCL27Q9Y4X3 112 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 TTC3P53804 2025 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 LOC105371242A0A075B767 164 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 BLACEA4D250 179 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 GABRDO14764 452 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 NBEAP1P0C6P0 100 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 CCL5P13501 91 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 CD52P31358 61 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 UCP3P55916 312 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 DUSP5Q16690 384 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ARMC12Q5T9G4 340 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 FAM83HQ6ZRV2 1179 aaPredicted RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ADIPOR2Q86V24 386 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 WDFY1Q8IWB7 410 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 NKAPQ8N5F7 415 aaKnown RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 OR4C5Q8NGB2 326 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 CHST6Q9GZX3 395 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 FARSAQ9Y285 508 aaKnown RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 Q9Y3F1 56 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 POMT1Q9Y6A1 747 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 NPC1O15118 1278 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF208O43345 1280 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 OR5AC1P0C628 307 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 GIMD1P0DJR0 217 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 MAOAP21397 527 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 BCKDHBP21953 392 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 HMGA2P52926 109 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 EXOSC6Q5RKV6 272 aaKnown RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 VWA1Q6PCB0 445 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 GLT6D1Q7Z4J2 308 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF280BQ86YH2 543 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ACBD7Q8N6N7 88 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ABHD3Q8WU67 409 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 GEMIN6Q8WXD5 167 aaKnown RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 OR5B2Q96R09 309 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 OR8D2Q9GZM6 311 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 B3GAT1Q9P2W7 334 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 AMDHD2Q9Y303 409 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 TGIF2-C20orf24A0A0A6YYL0 155 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 A0A1W2PPK0 400 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF320A2RRD8 509 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 DRGXA6NNA5 263 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 F8VVB4 439 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 F8VWA3 439 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 HYAL3O43820 417 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-204ENST00000380393 SCGB1D1O95968 90 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 LCATP04180 440 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 APODP05090 189 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 OR8U9P0C7N5 309 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 TACR1P25103 407 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 PTH2RP49190 550 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 NPY4RP50391 375 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 POLR2HP52434 150 aaKnown RBP8.51□□□□□ -1.05
PTPRA-204ENST00000380393 CBFBQ13951 182 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 DCAF4L1Q3SXM0 396 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 PRAMEF17Q5VTA0 474 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 MRM1Q6IN84 353 aaKnown RBP8.51□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF770Q6IQ21 691 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-204ENST00000380393 OR5M8Q8NGP6 311 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 OR13C5Q8NGS8 318 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 OR13C2Q8NGS9 318 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 OR13D1Q8NGV5 346 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 APOLD1Q96LR9 279 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 EIF5A2Q9GZV4 153 aaKnown RBP8.51□□□□□ -1.05
PTPRA-204ENST00000380393 WWTR1Q9GZV5 400 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 CSNK1G1Q9HCP0 422 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 APMAPQ9HDC9 416 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 KCNJ16Q9NPI9 418 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 RNF150Q9ULK6 438 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 TET1Q8NFU7 2136 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 SMIM35A0A1B0GVV1 85 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 F6UZH7 168 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 M0R296 226 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 PIRO00625 290 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 UBE2G2P60604 165 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 NAAAQ02083 359 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 PTSQ03393 145 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 UBE2V1Q13404 147 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 CEBPEQ15744 281 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 MAPK14Q16539 360 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF468Q5VIY5 522 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF585AQ6P3V2 769 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF836Q6ZNA1 936 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 CPOQ8IVL8 374 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 TMEM183AQ8IXX5 376 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 PIANPQ8IYJ0 282 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 CLECL1Q8IZS7 167 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 OR1J2Q8NGS2 313 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 C1orf216Q8TAB5 229 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 SLC25A43Q8WUT9 341 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-204ENST00000380393 NELFAQ9H3P2 528 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 PDE4DIPQ5VU43 2346 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 SCN10AQ9Y5Y9 1956 aa8.51□□□□□ -1.05
PTPRA-204ENST00000380393 KIR2DL5BA0A0G2JN68 375 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 KIR2DL5BA0A0G2JPC4 375 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 MGAT4DA6NG13 374 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 CASTOR2A6NHX0 329 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 A6NIZ1 184 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 SYT7O43581 403 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms