RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 HS3ST3B1Q9Y662 390 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ANTXRLA6NF34 631 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 SLC25A14O95258 325 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 TBX6O95947 436 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 CYB5R3P00387 301 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 TGFB1P01137 390 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 EPHX1P07099 455 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 CXCL1P09341 107 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 PGAM2P15259 253 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 CD70P32970 193 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ID4P47928 161 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 PTTG1IPP53801 180 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 EIF5AP63241 154 aaKnown RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 RASGEF1BQ0VAM2 473 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ENPP2Q13822 863 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 CPSF6Q16630 551 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 RNF151Q2KHN1 245 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 TCTN3Q6NUS6 607 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 KIRREL2Q6UWL6 708 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 BTNL8Q6UX41 500 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 BTNL3Q6UXE8 466 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ADIPOR2Q86V24 386 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 CD163Q86VB7 1156 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 GCNT2Q8N0V5 402 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 SEMA6DQ8NFY4 1073 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 OR2L3Q8NG85 312 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 OR4C16Q8NGL9 310 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ABHD4Q8TB40 342 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ASB11Q8WXH4 323 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 MUCL1Q96DR8 90 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 SLC22A12Q96S37 553 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 GPA33Q99795 319 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 HDAC8Q9BY41 377 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 SUSD2Q9UGT4 822 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 CORO2BQ9UQ03 480 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 COLEC10Q9Y6Z7 277 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 PLXNB3Q9ULL4 1909 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 A0A0B4J2A0 478 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 PRRT4C9JH25 899 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 C1QTNF3-AMACRE9PGA6 284 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 K7EP13 123 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 CCSO14618 274 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 CATP04040 527 aaKnown RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 RPN2P04844 631 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 IL6RP08887 468 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ADH5P11766 374 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 BRS3P32247 399 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 WNT5AP41221 380 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 SLC6A12P48065 614 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 AFF3P51826 1226 aaKnown RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 OR5I1Q13606 314 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 GXYLT1Q4G148 440 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ABLIM2Q6H8Q1 611 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 TEX38Q6PEX7 206 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ENPP7Q6UWV6 458 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 GKN2Q86XP6 184 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 FAM185AQ8N0U4 392 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 INO80EQ8NBZ0 244 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 OR13C5Q8NGS8 318 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 OR6N1Q8NGY5 312 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF671Q8TAW3 534 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 SLC7A13Q8TCU3 470 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 APOBEC4Q8WW27 367 aaKnown RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 ASB17Q8WXJ9 295 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 WDR34Q96EX3 536 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 FAM46AQ96IP4 442 aaKnown RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 NKX3-1Q99801 234 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 DPEP2Q9H4A9 486 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 SHPKQ9UHJ6 478 aa6.79□□□□□ -1.32
CDKL5-201ENST00000379989 EXOGQ9Y2C4 368 aaKnown RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 MUC22E2RYF6 1773 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-201ENST00000379989 A0A1W2PPK0 400 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 TRDCB7Z8K6 153 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF432O94892 652 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 PPBPP02775 128 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 TRGC2P03986 189 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 OR4A8P0C604 315 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 CISD3P0C7P0 127 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 TRGC1P0CF51 173 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 MMP11P24347 488 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 PPM1FP49593 454 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 PRLHRP49683 370 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 CDKN1CP49918 316 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 LHFPL4Q7Z7J7 247 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 HS6ST3Q8IZP7 471 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ARL14Q8N4G2 192 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 OR56B2PQ8NGI1 322 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ADAMTS17Q8TE56 1095 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ABHD5Q8WTS1 349 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 WBP2Q969T9 261 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 DERL3Q96Q80 235 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF2Q9BSG1 426 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ACTRT3Q9BYD9 372 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 FOXJ3Q9UPW0 622 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ADAM18Q9Y3Q7 739 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 LINC01553A4QN01 128 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 CBY3A6NI87 242 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 IGHEP01854 428 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms