RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CLEC4AQ9UMR7 237 aa17.4■□□□□ 0.38
SSU72-204ENST00000378726 RPH3AQ9Y2J0 694 aaPredicted RBP17.4■□□□□ 0.38
SSU72-204ENST00000378726 A0A087WZY1 265 aa17.4■□□□□ 0.38
SSU72-204ENST00000378726 FZD7O75084 574 aa17.4■□□□□ 0.38
SSU72-204ENST00000378726 PELI1Q96FA3 418 aa17.4■□□□□ 0.38
SSU72-204ENST00000378726 ADAD1Q96M93 576 aaKnown RBP17.4■□□□□ 0.38
SSU72-204ENST00000378726 ZFP64Q9NPA5 681 aa17.4■□□□□ 0.38
SSU72-204ENST00000378726 ALKBH4Q9NXW9 302 aa17.4■□□□□ 0.38
SSU72-204ENST00000378726 GNG8Q9UK08 70 aa17.4■□□□□ 0.38
SSU72-204ENST00000378726 ZNF222Q9UK12 451 aa17.4■□□□□ 0.38
SSU72-204ENST00000378726 B9D1Q9UPM9 204 aa17.4■□□□□ 0.38
SSU72-204ENST00000378726 B3GALT5Q9Y2C3 310 aa17.4■□□□□ 0.38
SSU72-204ENST00000378726 C7orf66A4D0T2 115 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 LEUTXA8MZ59 168 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 STMND1H3BQB6 276 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 DHFRP00374 187 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 GBX2P52951 348 aaPredicted RBP17.39■□□□□ 0.37
SSU72-204ENST00000378726 HSF2Q03933 536 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 OR13C5Q8NGS8 318 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 ZNF431Q8TF32 576 aaPredicted RBP17.39■□□□□ 0.37
SSU72-204ENST00000378726 PSMF1Q92530 271 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 MRPL48Q96GC5 212 aaKnown RBP17.39■□□□□ 0.37
SSU72-204ENST00000378726 THOC3Q96J01 351 aaKnown RBP17.39■□□□□ 0.37
SSU72-204ENST00000378726 GPR137Q96N19 417 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 OR5B2Q96R09 309 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 VSX1Q9NZR4 365 aaPredicted RBP17.39■□□□□ 0.37
SSU72-204ENST00000378726 MGAT4AQ9UM21 535 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 FKBP7Q9Y680 259 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 FREM2Q5SZK8 3169 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 CPAMD8Q8IZJ3 1885 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 SPAARA0A1B0GVQ0 90 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 A0A1W2PNR3 127 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 SLC16A7O60669 478 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 FTH1P19P0C7X4 201 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 LIFP15018 202 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 IFNGR1P15260 489 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 CD53P19397 219 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 SDHBP21912 280 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 DSCR4P56555 118 aaPredicted RBP17.39■□□□□ 0.37
SSU72-204ENST00000378726 TMEM176BQ3YBM2 270 aaPredicted RBP17.39■□□□□ 0.37
SSU72-204ENST00000378726 PYHIN1Q6K0P9 492 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 PRSS33Q8NF86 280 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 FAM86C1Q9NVL1 165 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 ING4Q9UNL4 249 aa17.39■□□□□ 0.37
SSU72-204ENST00000378726 A0A0B4J203 849 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 SLC22A23A1A5C7 686 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 GPANK1O95872 356 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 P04436 131 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 CD3GP09693 182 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 FKBP2P26885 142 aaKnown RBP17.38■□□□□ 0.37
SSU72-204ENST00000378726 STOMP27105 288 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 SFTPDP35247 375 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 SIRPAP78324 504 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 DMKNQ6E0U4 476 aaPredicted RBP17.38■□□□□ 0.37
SSU72-204ENST00000378726 PXKQ7Z7A4 578 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 TPRA1Q86W33 373 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 OR11H4Q8NGC9 324 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 PGLYRP3Q96LB9 341 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 SMAD5Q99717 465 aaKnown RBP17.38■□□□□ 0.37
SSU72-204ENST00000378726 DPAGT1Q9H3H5 408 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 WDR76Q9H967 626 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 IL17BQ9UHF5 180 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 PCSK5Q92824 1860 aa17.38■□□□□ 0.37
SSU72-204ENST00000378726 NPIPA5E9PKD4 350 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 PSMD9O00233 223 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 CBR3O75828 277 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 TCRBP04435 133 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 CXCL3P19876 107 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 CENPAP49450 140 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 PER3P56645 1201 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 POU3F1Q03052 451 aaPredicted RBP17.37■□□□□ 0.37
SSU72-204ENST00000378726 ESCO2Q56NI9 601 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 ZBTB37Q5TC79 503 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 SLC35D2Q76EJ3 337 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 GTPBP8Q8N3Z3 284 aaPredicted RBP17.37■□□□□ 0.37
SSU72-204ENST00000378726 SLC25A43Q8WUT9 341 aaPredicted RBP17.37■□□□□ 0.37
SSU72-204ENST00000378726 GHSRQ92847 366 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 B3GNT2Q9NY97 397 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 ST6GALNAC2Q9UJ37 374 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 NPIPA1Q9UND3 350 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 OGG1O15527 345 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 ZIC3O60481 467 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 SC5DO75845 299 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 HSF1Q00613 529 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 ACSM3Q53FZ2 586 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 ZNF782Q6ZMW2 699 aaPredicted RBP17.37■□□□□ 0.37
SSU72-204ENST00000378726 CDC20BQ86Y33 519 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 SIAH3Q8IW03 269 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 SLC38A6Q8IZM9 456 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 BEST3Q8N1M1 668 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 ASB10Q8WXI3 467 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 YIPF5Q969M3 257 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 MS4A3Q96HJ5 214 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 ARPC5LQ9BPX5 153 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 TSPAN10Q9H1Z9 355 aaPredicted RBP17.37■□□□□ 0.37
SSU72-204ENST00000378726 OR51J1Q9H342 316 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 EMC7Q9NPA0 242 aa17.37■□□□□ 0.37
SSU72-204ENST00000378726 A0A1W2PPK0 400 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 HLA-DQA2P01906 255 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 GIFP27352 417 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms