RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 RERGLQ9H628 205 aa11.52□□□□□ -0.57
CKAP2-202ENST00000378034 SRA1Q9HD15 236 aaKnown RBP11.52□□□□□ -0.57
CKAP2-202ENST00000378034 ABCA4P78363 2273 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 FBN2P35556 2912 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 SAC3D1A6NKF1 404 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 SHISA9B4DS77 424 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 HS3ST1O14792 307 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 PLAUP00749 431 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 SERPINA5P05154 406 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 MMP7P09237 267 aaPredicted RBP11.51□□□□□ -0.57
CKAP2-202ENST00000378034 IGFBP5P24593 272 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 IDH3GP51553 393 aaPredicted RBP11.51□□□□□ -0.57
CKAP2-202ENST00000378034 NAAAQ02083 359 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 PLP2Q04941 152 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 ZNF672Q499Z4 452 aaPredicted RBP11.51□□□□□ -0.57
CKAP2-202ENST00000378034 ACSM5Q6NUN0 579 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 SLC22A25Q6T423 547 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 C20orf204Q6ZNR8 217 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 IQCF1Q8N6M8 205 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 FGFBP3Q8TAT2 258 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 TSSK2Q96PF2 358 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 PRRG3Q9BZD7 231 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 NOX3Q9HBY0 568 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 USE1Q9NZ43 259 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 TMEFF2Q9UIK5 374 aaPredicted RBP11.51□□□□□ -0.57
CKAP2-202ENST00000378034 TIMM10BQ9Y5J6 103 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 ITPR2Q14571 2701 aa11.51□□□□□ -0.57
CKAP2-202ENST00000378034 DCTN6O00399 190 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 PAICSP22234 425 aaKnown RBP11.5□□□□□ -0.57
CKAP2-202ENST00000378034 CENPAP49450 140 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 NPRL3Q12980 569 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 CRMP1Q14194 572 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 ZNF611Q8N823 705 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 OR4F15Q8NGB8 312 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 LILRB1Q8NHL6 650 aaPredicted RBP11.5□□□□□ -0.57
CKAP2-202ENST00000378034 AKAP1Q92667 903 aaKnown RBP eCLIP11.5□□□□□ -0.57
CKAP2-202ENST00000378034 HTRA1Q92743 480 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 FBXO17Q96EF6 278 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 C9orf16Q9BUW7 83 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 ZNF416Q9BWM5 594 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 NMNAT2Q9BZQ4 307 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 HRNRQ86YZ3 2850 aaPredicted RBP11.5□□□□□ -0.57
CKAP2-202ENST00000378034 RAI1Q7Z5J4 1906 aaPredicted RBP11.5□□□□□ -0.57
CKAP2-202ENST00000378034 ABCA12Q86UK0 2595 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 IQCMA0A1B0GVH7 501 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 ANKRD65E5RJM6 399 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 SURF4O15260 269 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 PATE4P0C8F1 98 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 GAAP10253 952 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 BLVRAP53004 296 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 HSF2Q03933 536 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 DAG1Q14118 895 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 ENDOGQ14249 297 aaKnown RBP11.5□□□□□ -0.57
CKAP2-202ENST00000378034 RAB39AQ14964 217 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 PTGES3Q15185 160 aaKnown RBP11.5□□□□□ -0.57
CKAP2-202ENST00000378034 PAMR1Q6UXH9 720 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 ALDH16A1Q8IZ83 802 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 CYB561A3Q8NBI2 242 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 KBTBD8Q8NFY9 601 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 OR1J2Q8NGS2 313 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 NINJ1Q92982 152 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 FBXW5Q969U6 566 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 CIB1Q99828 191 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 UBTD1Q9HAC8 227 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 KCNG2Q9UJ96 466 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 ORC6Q9Y5N6 252 aa11.5□□□□□ -0.57
CKAP2-202ENST00000378034 HEATR1Q9H583 2144 aaKnown RBP11.49□□□□□ -0.57
CKAP2-202ENST00000378034 MITFO75030 526 aaPredicted RBP11.49□□□□□ -0.57
CKAP2-202ENST00000378034 TMCC2O75069 709 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 BAG2O95816 211 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 ALPLP05186 524 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 SCG5P05408 212 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 CELA3BP08861 270 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 ZNF32P17041 273 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 ALDH3A2P51648 485 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 CDH11P55287 796 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 SPOCK1Q08629 439 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 SCRN3Q0VDG4 424 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 AQP6Q13520 282 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 PROKR2Q8NFJ6 384 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 SLC26A10Q8NG04 563 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 C11orf40Q8WZ69 217 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 PLEKHA8Q96JA3 519 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 GABARAPL3Q9BY60 117 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 OR2H1Q9GZK4 316 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 FN3KQ9H479 309 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 EMC7Q9NPA0 242 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 CISD1Q9NZ45 108 aaKnown RBP11.49□□□□□ -0.57
CKAP2-202ENST00000378034 ST6GALNAC2Q9UJ37 374 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 POU2F3Q9UKI9 436 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 MOKQ9UQ07 419 aa11.49□□□□□ -0.57
CKAP2-202ENST00000378034 IGHV2OR16-5A0A0B4J2B6 119 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 ZAR1LA6NP61 321 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 ATP6V1G2-DDX39BF2Z307 99 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 RAF1P04049 648 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 ZNF35P13682 527 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 SPI1P17947 270 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 RAD23AP54725 363 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 PSG4Q00888 419 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 TEKQ02763 1124 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms