RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 LINC00114Q6XXX2 140 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 ZNF782Q6ZMW2 699 aaPredicted RBP11.09□□□□□ -0.63
VRK3-202ENST00000377011 GHDCQ8N2G8 530 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 OR4M2Q8NGB6 313 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 OR4M1Q8NGD0 313 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 OR5M9Q8NGP3 310 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 OR2T27Q8NH04 317 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 SMPDL3BQ92485 455 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 RELTQ969Z4 430 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 PGLYRP3Q96LB9 341 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 THAP7Q9BT49 309 aaPredicted RBP11.09□□□□□ -0.63
VRK3-202ENST00000377011 HCAR1Q9BXC0 346 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 ANGPTL4Q9BY76 406 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 HDHD2Q9H0R4 259 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 MED20Q9H944 212 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 MEPEQ9NQ76 525 aaPredicted RBP11.09□□□□□ -0.63
VRK3-202ENST00000377011 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.09□□□□□ -0.63
VRK3-202ENST00000377011 PRODH2Q9UF12 536 aa11.09□□□□□ -0.63
VRK3-202ENST00000377011 TEX15Q9BXT5 2789 aa11.08□□□□□ -0.63
VRK3-202ENST00000377011 CACNA1CQ13936 2221 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 A0A1B0GWA3 101 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 NPIPA2E9PIF3 369 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 NPIPA3F8WFD2 350 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 ICOSLGO75144 302 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 REM1O75628 298 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 UBL3O95164 117 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 DHFRP00374 187 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 AHCYP23526 432 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 SHC1P29353 583 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 GABRA3P34903 492 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 HSF2Q03933 536 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 LGALS3BPQ08380 585 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 CRMP1Q14194 572 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 GPR176Q14439 515 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 ZNHIT3Q15649 155 aaPredicted RBP11.08□□□□□ -0.64
VRK3-202ENST00000377011 ZNF141Q15928 474 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 CCDC58Q4VC31 144 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 SLC35D3Q5M8T2 416 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 APOOLQ6UXV4 268 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 CEACAM19Q7Z692 300 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 CD163Q86VB7 1156 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 SAMD12Q8N8I0 201 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 WDSUB1Q8N9V3 476 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 ITLN2Q8WWU7 325 aaPredicted RBP11.08□□□□□ -0.64
VRK3-202ENST00000377011 MED30Q96HR3 178 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 C4orf36Q96KX1 117 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 ENKD1Q9H0I2 346 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 ZFP64Q9NPA5 681 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 ST6GALNAC2Q9UJ37 374 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 RASD1Q9Y272 281 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 NUBP2Q9Y5Y2 271 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 CACNG2Q9Y698 323 aa11.08□□□□□ -0.64
VRK3-202ENST00000377011 CTDSPLO15194 276 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 GPRIN2O60269 458 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 IGF2P01344 180 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 IGHG3P01860 377 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 EIF4EP06730 217 aaKnown RBP11.07□□□□□ -0.64
VRK3-202ENST00000377011 TPOP07202 933 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 RAB3BP20337 219 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 GRNP28799 593 aaKnown RBP11.07□□□□□ -0.64
VRK3-202ENST00000377011 PTGS2P35354 604 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 MMP15P51511 669 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 GBX2P52951 348 aaPredicted RBP11.07□□□□□ -0.64
VRK3-202ENST00000377011 PLAURQ03405 335 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 IKZF1Q13422 519 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 ULK3Q6PHR2 472 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 PLXDC2Q6UX71 529 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 FAM109AQ8N4B1 249 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 TRMT10AQ8TBZ6 339 aaKnown RBP11.07□□□□□ -0.64
VRK3-202ENST00000377011 RNF138Q8WVD3 245 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 SMIM19Q96E16 107 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 OR51V1Q9H2C8 321 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 DPAGT1Q9H3H5 408 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 RANBP3Q9H6Z4 567 aaPredicted RBP11.07□□□□□ -0.64
VRK3-202ENST00000377011 MCCC2Q9HCC0 563 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 DNAJB12Q9NXW2 375 aaKnown RBP11.07□□□□□ -0.64
VRK3-202ENST00000377011 FBXL2Q9UKC9 423 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 ICAM5Q9UMF0 924 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 ING4Q9UNL4 249 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 ABCA12Q86UK0 2595 aa11.07□□□□□ -0.64
VRK3-202ENST00000377011 J3QLW9 94 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 GSTZ1O43708 216 aaPredicted RBP11.06□□□□□ -0.64
VRK3-202ENST00000377011 NDUFB2O95178 105 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 PPP1R3DO95685 299 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 ABOP16442 354 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 ZNF19P17023 458 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 NOS3P29474 1203 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 HTR2BP41595 481 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 ACAA2P42765 397 aaKnown RBP11.06□□□□□ -0.64
VRK3-202ENST00000377011 FGFBP1Q14512 234 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 CDONQ4KMG0 1287 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 ACSM3Q53FZ2 586 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 RTL6Q6ICC9 239 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 RPL22L1Q6P5R6 122 aaKnown RBP11.06□□□□□ -0.64
VRK3-202ENST00000377011 FIGNL1Q6PIW4 674 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 UBE2J2Q8N2K1 259 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 FAM57AQ8TBR7 257 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 HAVCR2Q8TDQ0 301 aa11.06□□□□□ -0.64
VRK3-202ENST00000377011 CNOT9Q92600 299 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms