RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PIGMQ9H3S5 423 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 NIT2Q9NQR4 276 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 MRPS2Q9Y399 296 aaKnown RBP11.5□□□□□ -0.57
VPS13A-204ENST00000376634 DLEC1Q9Y238 1755 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 NTF3P20783 257 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 S100A11P31949 105 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 FGF13Q92913 245 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 KCND3Q9UK17 655 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 LGALS8O00214 317 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 LBX1P52954 281 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 RANBP10Q6VN20 620 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 MARC2Q969Z3 335 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 NKX6-2Q9C056 277 aaPredicted RBP11.5□□□□□ -0.57
VPS13A-204ENST00000376634 AQP9O43315 295 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 CPN1P15169 458 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 UBE2IP63279 158 aaKnown RBP11.5□□□□□ -0.57
VPS13A-204ENST00000376634 THNSL2Q86YJ6 484 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 WDTC1Q8N5D0 677 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 SPHK1Q9NYA1 384 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 PADI1Q9ULC6 663 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 SERINC4A6NH21 518 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 AGFG1P52594 562 aaKnown RBP11.5□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF596Q8TC21 504 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF480Q8WV37 535 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 SRRQ9GZT4 340 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 POMT1Q9Y6A1 747 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 CLDN24A6NM45 220 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 HNF1AP20823 631 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 HTR1FP30939 366 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 AMTP48728 403 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 SPCS2Q15005 226 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 EXT1Q16394 746 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 ZCWPW2A0A1B0GU75 182 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 OR6C68A6NDL8 312 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF814B7Z6K7 855 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 SLC5A2P31639 672 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 GNB2P62879 340 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 FAM162BQ5T6X4 162 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 HENMT1Q5T8I9 393 aaKnown RBP11.5□□□□□ -0.57
VPS13A-204ENST00000376634 PNPLA1Q8N8W4 532 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 OR6K3Q8NGY3 331 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 BORCS6Q96GS4 357 aa11.5□□□□□ -0.57
VPS13A-204ENST00000376634 SIGLEC6O43699 453 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 H3F3AP84243 136 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 OPCMLQ14982 345 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 IAH1Q2TAA2 248 aaPredicted RBP11.49□□□□□ -0.57
VPS13A-204ENST00000376634 STEAP1BQ6NZ63 245 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 SEMA4CQ9C0C4 833 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 GLCEO94923 617 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 INHBCP55103 352 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 PARS2Q7L3T8 475 aaKnown RBP11.49□□□□□ -0.57
VPS13A-204ENST00000376634 NEURL3Q96EH8 262 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 RBFOX1Q9NWB1 397 aaKnown RBP11.49□□□□□ -0.57
VPS13A-204ENST00000376634 YTHDF2Q9Y5A9 579 aaKnown RBP11.49□□□□□ -0.57
VPS13A-204ENST00000376634 ICMTO60725 284 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 GASTP01350 101 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 ERVFC1P60507 584 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 HTR4Q13639 388 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 CLEC14AQ86T13 490 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 RBPMSQ93062 196 aaKnown RBP11.49□□□□□ -0.57
VPS13A-204ENST00000376634 KIR2DS1A0A191URI9 304 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 UMAD1C9J7I0 102 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 OR13C7P0DN81 318 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 KIR2DS4P43632 304 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 CLDN12P56749 244 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 BAMBIQ13145 260 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 KIR2DS1Q14954 304 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 C19orf35Q6ZS72 473 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF687Q8N1G0 1237 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 GPR26Q8NDV2 337 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 OR10Z1Q8NGY1 313 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 LMO3Q8TAP4 145 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 TMEM200CA6NKL6 621 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 EFSO43281 561 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 SPP1P10451 314 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 SYT9Q86SS6 491 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 SLC24A4Q8NFF2 622 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 ABHD4Q8TB40 342 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 HTR6P50406 440 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 MAT1AQ00266 395 aaKnown RBP11.49□□□□□ -0.57
VPS13A-204ENST00000376634 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 SIAH3Q8IW03 269 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 MDGA1Q8NFP4 955 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 FAM103A1Q9BTL3 118 aaKnown RBP11.49□□□□□ -0.57
VPS13A-204ENST00000376634 LTBP3Q9NS15 1303 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 SMLR1H3BR10 107 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 J3KTA2 159 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 TGM1P22735 817 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 PXNP49023 591 aaPredicted RBP11.49□□□□□ -0.57
VPS13A-204ENST00000376634 MRPS21P82921 87 aaKnown RBP11.49□□□□□ -0.57
VPS13A-204ENST00000376634 BCL7AQ4VC05 210 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 HSD17B11Q8NBQ5 300 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 PRSS44E7EML9 344 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 CCR7P32248 378 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 WNT7BP56706 349 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 TAS2R45P59539 299 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 LINC00696Q6ZRV3 163 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 SLC51BQ86UW2 128 aa11.49□□□□□ -0.57
VPS13A-204ENST00000376634 BHLHE23Q8NDY6 225 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms