RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ZBTB49Q6ZSB9 765 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SHFQ7M4L6 423 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 RNF113BQ8IZP6 322 aaKnown RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 SDR9C7Q8NEX9 313 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 OR4K5Q8NGD3 323 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 PSMA8Q8TAA3 256 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 THEM6Q8WUY1 208 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SMURF2Q9HAU4 748 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 DYNLRB1Q9NP97 96 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SEMA5BQ9P283 1151 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SPRR3Q9UBC9 169 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 ZNF229Q9UJW7 825 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 RNF6Q9Y252 685 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SLC35A3Q9Y2D2 325 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 PCDHGA9Q9Y5G4 932 aaKnown RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 IER3IP1Q9Y5U9 82 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 PCNX3Q9H6A9 2034 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SLC35F4A4IF30 521 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 A6NIN4 97 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 MARCH11A6NNE9 402 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 VSTM5A8MXK1 200 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 H3BMH7 237 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 CLIC3O95833 236 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 GPANK1O95872 356 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 MBP02144 154 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SPARCP09486 303 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 H2AFB1P0C5Y9 115 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 H2AFB2P0C5Z0 115 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 FASP25445 335 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 ERP29P30040 261 aaKnown RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 PYCR1P32322 319 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 ACVR1BP36896 505 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 NUDT6P53370 316 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SNU13P55769 128 aaKnown RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 MGAT2Q10469 447 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 POU4F2Q12837 409 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 NTRK2Q16620 822 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 WBP2NLQ6ICG8 309 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 TPRA1Q86W33 373 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 LINC00346Q8IVM7 164 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 OR52E2Q8NGJ4 325 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 PAQR8Q8TEZ7 354 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 EDARADDQ8WWZ3 215 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 SLC7A6Q92536 515 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 KISS1RQ969F8 398 aaPredicted RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 ST6GAL2Q96JF0 529 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 CNBD2Q96M20 576 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 ZNF583Q96ND8 569 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 TRNT1Q96Q11 434 aaKnown RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 KAT8Q9H7Z6 458 aaKnown RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 CCM2LQ9NUG4 571 aaPredicted RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 KCNE5Q9UJ90 142 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 ZNF346Q9UL40 294 aaKnown RBP6.29□□□□□ -1.4
USP1-202ENST00000371146 SLC5A6Q9Y289 635 aa6.29□□□□□ -1.4
USP1-202ENST00000371146 A0A087WV62 115 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 TMEM72A0PK05 275 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 AGAP5A6NIR3 686 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 A6NLC8 198 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 SLC16A7O60669 478 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ZNF823P16415 610 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 GIPRP48546 466 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 LIPNQ5VXI9 398 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 LRFN4Q6PJG9 635 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 KCTD8Q6ZWB6 473 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 SSX9Q7RTT3 188 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 RIMKLAQ8IXN7 391 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PGAM4Q8N0Y7 254 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ZCCHC24Q8N2G6 241 aaKnown RBP6.28□□□□□ -1.4
USP1-202ENST00000371146 Q8NA96 180 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 C9orf106Q8NAJ2 232 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 OR2M3Q8NG83 312 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 TMEM239Q8WW34 195 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 GATAD2BQ8WXI9 593 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 RFT1Q96AA3 541 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 SAMD8Q96LT4 415 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 BARD1Q99728 777 aaKnown RBP6.28□□□□□ -1.4
USP1-202ENST00000371146 METTL9Q9H1A3 318 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 MED20Q9H944 212 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 BIN3Q9NQY0 253 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 LOC102723996A0A087X1L8 192 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 A0A0U1RQV5 110 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 TRAPPC13A5PLN9 417 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ASPDHA6ND91 283 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 GJE1A6NN92 205 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 BBIP1A8MTZ0 92 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 FARS2O95363 451 aaKnown RBP6.28□□□□□ -1.4
USP1-202ENST00000371146 AK1P00568 194 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 HLA-DOBP13765 273 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 SRD5A2P31213 254 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 TGFBR3Q03167 851 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PLP2Q04941 152 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PUDPQ08623 228 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 HIKESHIQ53FT3 197 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ALG10Q5BKT4 473 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 DLEU7Q6UYE1 221 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 SLC35D2Q76EJ3 337 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 GRINAQ7Z429 371 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 CAMKMTQ7Z624 323 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 OR5AS1Q8N127 324 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 RNASE11Q8TAA1 199 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms