RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 ASH2LQ9UBL3 628 aa10.53□□□□□ -0.72
SMARCA1-201ENST00000371121 A0A1B0GV90 55 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 RNASEK-C17orf49H0YIS7 233 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 EFSO43281 561 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 PNPP00491 289 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 CST5P28325 142 aaPredicted RBP10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 ACTR1BP42025 376 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 GPR1P46091 355 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 NAAAQ02083 359 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 SREBF2Q12772 1141 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 IL34Q6ZMJ4 242 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 ZNF574Q6ZN55 896 aaPredicted RBP10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 LRRC75AQ8NAA5 344 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 RNF141Q8WVD5 230 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 FAM3DQ96BQ1 224 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 ELF4Q99607 663 aaPredicted RBP10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 IER2Q9BTL4 223 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 ALG12Q9BV10 488 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 LSM7Q9UK45 103 aaKnown RBP10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 DMRT1Q9Y5R6 373 aa10.52□□□□□ -0.72
SMARCA1-201ENST00000371121 IGKV1D-42A0A075B6H8 117 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 C1QTNF3-AMACRE9PGA6 284 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF208O43345 1280 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 BRINP1O60477 761 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 CPT2P23786 658 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 AQP2P41181 271 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 CENPAP49450 140 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 PON3Q15166 354 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 IRF4Q15306 451 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 LPCAT3Q6P1A2 487 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 OR4K17Q8NGC6 315 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 OR4N2Q8NGD1 307 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 AKR1E2Q96JD6 320 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 GAS2L1Q99501 681 aaPredicted RBP10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC25A21Q9BQT8 299 aaPredicted RBP10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 PRMT8Q9NR22 394 aaPredicted RBP10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 HCFC1R1Q9NWW0 138 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 DBIP07108 87 aaKnown RBP10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 LYL1P12980 280 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 RAB5BP61020 215 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 ID2Q02363 134 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 SKP2Q13309 424 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 OR10K2Q6IF99 312 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 CD163Q86VB7 1156 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 SOCS4Q8WXH5 440 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 LMF1Q96S06 567 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 GAL3ST1Q99999 423 aa10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 NOP16Q9Y3C1 178 aaKnown RBP10.52□□□□□ -0.73
SMARCA1-201ENST00000371121 TRIOO75962 3097 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 LOC100509620A0A075B734 347 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 A0A1B0GW55 424 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 GLCEO94923 617 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 S100A6P06703 90 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 DCNP07585 359 aaKnown RBP10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 OR8U9P0C7N5 309 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 DUX4L2P0CJ85 424 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 DUX4L3P0CJ86 424 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 DUX4L4P0CJ87 422 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 DUX4L5P0CJ88 424 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 DUX4L6P0CJ89 424 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 DUX4L7P0CJ90 424 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 TAS2R19P59542 299 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 NKPD1Q17RQ9 610 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 WDR38Q5JTN6 314 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 TMEFF1Q8IYR6 380 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 LRRC25Q8N386 305 aaPredicted RBP10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 OR8U1Q8NH10 309 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 RNF128Q8TEB7 428 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 SECTM1Q8WVN6 248 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 TMEM41AQ96HV5 264 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 ARL5BQ96KC2 179 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC2A8Q9NY64 477 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 DUX4Q9UBX2 424 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 FARSAQ9Y285 508 aaKnown RBP10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 NPIPB9F8W1W9 429 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 EPCAMP16422 314 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 HTRA3P83110 453 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 PRKCZQ05513 592 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 RUNX2Q13950 521 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 EIPR1Q53HC9 387 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 ABHD13Q7L211 337 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 AMZ2Q86W34 360 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF227Q86WZ6 799 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 OR4E2Q8NGC2 313 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 OR51A2Q8NGJ7 313 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 OR51F2Q8NH61 342 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 WISP1O95388 367 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 CSN2P05814 226 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 RHOP08100 348 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 LAMP2P13473 410 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 CSNK1EP49674 416 aaKnown RBP10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 BTN3A2P78410 334 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 GAS6Q14393 721 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 EXOSC7Q15024 291 aaKnown RBP10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 BPIFB2Q8N4F0 458 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF563Q8TA94 476 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 C15orf40Q8WUR7 153 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 TMEM230Q96A57 120 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC5A7Q9GZV3 580 aa10.51□□□□□ -0.73
SMARCA1-201ENST00000371121 DZANK1Q9NVP4 752 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms