RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 GBX2P52951 348 aaPredicted RBP17.25■□□□□ 0.35
CHTOP-204ENST00000368694 RPS25P62851 125 aaKnown RBP17.25■□□□□ 0.35
CHTOP-204ENST00000368694 TMEM123Q8N131 208 aa17.25■□□□□ 0.35
CHTOP-204ENST00000368694 PELI1Q96FA3 418 aa17.25■□□□□ 0.35
CHTOP-204ENST00000368694 TMED9Q9BVK6 235 aa17.25■□□□□ 0.35
CHTOP-204ENST00000368694 RNF167Q9H6Y7 350 aa17.25■□□□□ 0.35
CHTOP-204ENST00000368694 KLHL9Q9P2J3 617 aa17.25■□□□□ 0.35
CHTOP-204ENST00000368694 GRIP1Q9Y3R0 1128 aa17.25■□□□□ 0.35
CHTOP-204ENST00000368694 GPX5O75715 221 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 ZNF432O94892 652 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 LAP3P28838 519 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 TMPRSS3P57727 454 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 TRIM16LQ309B1 348 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 SLC18B1Q6NT16 456 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 PLEKHG7Q6ZR37 379 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 Q6ZS92 163 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 OR10H5Q8NGA6 315 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 FNDC9Q8TBE3 224 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 TM9SF2Q99805 663 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 SSR3Q9UNL2 185 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 PRR32B1ATL7 298 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 IGHG3P01860 377 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 KRT8P05787 483 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 OR8G3PP0DMU2 310 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 CRYBB2P43320 205 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 EIF2B1Q14232 305 aaKnown RBP17.24■□□□□ 0.35
CHTOP-204ENST00000368694 ZNF846Q147U1 533 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 LRFN4Q6PJG9 635 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 SLC25A47Q6Q0C1 308 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 ARL9Q6T311 187 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 AAED1Q7RTV5 226 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 YIPF7Q8N8F6 280 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 BOD1L1Q8NFC6 3051 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 RNF128Q8TEB7 428 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 EXTL1Q92935 676 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 ABHD17AQ96GS6 310 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 WDYHV1Q96HA8 205 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 CDADC1Q9BWV3 514 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 RCE1Q9Y256 329 aa17.24■□□□□ 0.35
CHTOP-204ENST00000368694 SIRT4Q9Y6E7 314 aaPredicted RBP17.24■□□□□ 0.35
CHTOP-204ENST00000368694 HRGP04196 525 aa17.23■□□□□ 0.35
CHTOP-204ENST00000368694 TACSTD2P09758 323 aa17.23■□□□□ 0.35
CHTOP-204ENST00000368694 CPN1P15169 458 aa17.23■□□□□ 0.35
CHTOP-204ENST00000368694 CDAP32320 146 aa17.23■□□□□ 0.35
CHTOP-204ENST00000368694 RBMXL3Q8N7X1 1067 aaKnown RBP17.23■□□□□ 0.35
CHTOP-204ENST00000368694 C11orf40Q8WZ69 217 aa17.23■□□□□ 0.35
CHTOP-204ENST00000368694 TMEM54Q969K7 222 aa17.23■□□□□ 0.35
CHTOP-204ENST00000368694 TTYH2Q9BSA4 534 aa17.23■□□□□ 0.35
CHTOP-204ENST00000368694 SF3B6Q9Y3B4 125 aaKnown RBP17.23■□□□□ 0.35
CHTOP-204ENST00000368694 SPENQ96T58 3664 aaKnown RBP17.23■□□□□ 0.35
CHTOP-204ENST00000368694 PHF3Q92576 2039 aaKnown RBP17.22■□□□□ 0.35
CHTOP-204ENST00000368694 SLC43A1O75387 559 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 PSMB10P40306 273 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 UCNP55089 124 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 EGR3Q06889 387 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 SLC3A1Q07837 685 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 TBR1Q16650 682 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 PHYHD1Q5SRE7 291 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 LINC00346Q8IVM7 164 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 TAAR6Q96RI8 345 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 AMELYQ99218 206 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 ULBP2Q9BZM5 246 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 MRM2Q9UI43 246 aaKnown RBP17.22■□□□□ 0.35
CHTOP-204ENST00000368694 POLR1DQ9Y2S0 133 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 METTL15A6NJ78 407 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 CLDN25C9JDP6 229 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 TMCC2O75069 709 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 AQP8O94778 261 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 RPP14O95059 124 aaKnown RBP17.22■□□□□ 0.35
CHTOP-204ENST00000368694 SIRPAP78324 504 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 GPR50Q13585 617 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 ZNF684Q5T5D7 378 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 GDPGP1Q6ZNW5 385 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 SPATC1Q76KD6 591 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 KCTD20Q7Z5Y7 419 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 ASB17Q8WXJ9 295 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 INTS12Q96CB8 462 aaKnown RBP17.22■□□□□ 0.35
CHTOP-204ENST00000368694 TRMT61AQ96FX7 289 aaKnown RBP17.22■□□□□ 0.35
CHTOP-204ENST00000368694 WDR12Q9GZL7 423 aaKnown RBP17.22■□□□□ 0.35
CHTOP-204ENST00000368694 DCSTAMPQ9H295 470 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 EMC3Q9P0I2 261 aa17.22■□□□□ 0.35
CHTOP-204ENST00000368694 FOXD3Q9UJU5 478 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-204ENST00000368694 ANKRD11Q6UB99 2663 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-204ENST00000368694 PIEZO1Q92508 2521 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 GPR171O14626 319 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 EDNRAP25101 427 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 NTF4P34130 210 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 GUCA1AP43080 201 aaPredicted RBP17.21■□□□□ 0.35
CHTOP-204ENST00000368694 USP43Q70EL4 1123 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 C20orf196Q8IYI0 205 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 ZNF454Q8N9F8 522 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 KBTBD8Q8NFY9 601 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 HTRA1Q92743 480 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 ABHD6Q9BV23 337 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 RBM24Q9BX46 236 aaKnown RBP17.21■□□□□ 0.35
CHTOP-204ENST00000368694 HMG20AQ9NP66 347 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 LUZP4Q9P127 313 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 DAPK2Q9UIK4 370 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 TP53TG5Q9Y2B4 290 aa17.21■□□□□ 0.35
CHTOP-204ENST00000368694 NOSIPQ9Y314 301 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms