RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 NRN1LQ496H8 165 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 DEFB121Q5J5C9 76 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 WDR25Q64LD2 544 aaPredicted RBP12.11□□□□□ -0.47
VAMP4-202ENST00000367740 NLRC3Q7RTR2 1065 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 LRRC18Q8N456 261 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 HIPK4Q8NE63 616 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 OR4S1Q8NGB4 309 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 OR6S1Q8NH40 331 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 OR6X1Q8NH79 312 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 VANGL1Q8TAA9 524 aaPredicted RBP12.11□□□□□ -0.47
VAMP4-202ENST00000367740 OR2V2Q96R30 315 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 B9D2Q9BPU9 175 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 OCSTAMPQ9BR26 566 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 SPATA9Q9BWV2 254 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 ASPNQ9BXN1 380 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 MMP28Q9H239 520 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 ASIC5Q9NY37 505 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 MRPL39Q9NYK5 338 aaKnown RBP12.11□□□□□ -0.47
VAMP4-202ENST00000367740 EIF3KQ9UBQ5 218 aaKnown RBP12.11□□□□□ -0.47
VAMP4-202ENST00000367740 WI2-2373I1.2A0A1W2PRP0 233 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 LRRN3E7EW58 273 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 PLPP3O14495 311 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 ICMTO60725 284 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 CYB5R3P00387 301 aaPredicted RBP12.1□□□□□ -0.47
VAMP4-202ENST00000367740 AHCYP23526 432 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 ANXA11P50995 505 aaKnown RBP12.1□□□□□ -0.47
VAMP4-202ENST00000367740 TXNL4AP83876 142 aaKnown RBP12.1□□□□□ -0.47
VAMP4-202ENST00000367740 RPS26P11Q5JNZ5 115 aaPredicted RBP12.1□□□□□ -0.47
VAMP4-202ENST00000367740 ANXA8L1Q5VT79 327 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 UNQ6126/PRO20091Q6UXV3 157 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 ZNF841Q6ZN19 808 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 HOMEZQ8IX15 550 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 SCCPDHQ8NBX0 429 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 ZNF420Q8TAQ5 688 aaPredicted RBP12.1□□□□□ -0.47
VAMP4-202ENST00000367740 LHX4Q969G2 390 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 TUBGCP3Q96CW5 907 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 WDFY2Q96P53 400 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 FMO2Q99518 471 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 NOP53Q9NZM5 478 aaKnown RBP12.1□□□□□ -0.47
VAMP4-202ENST00000367740 RPS6KB2Q9UBS0 482 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 TBK1Q9UHD2 729 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 CSMD3Q7Z407 3707 aa12.1□□□□□ -0.47
VAMP4-202ENST00000367740 A0A1B0GWA3 101 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 C11orf98E9PRG8 122 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 BCHEP06276 602 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 ABHD2P08910 425 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 QDPRP09417 244 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 PGA4P0DJD7 388 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 PGA3P0DJD8 388 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 HTR2AP28223 471 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 EPHA3P29320 983 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 ECHS1P30084 290 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 EMX2Q04743 252 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 COX10Q12887 443 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 MAD2L1Q13257 205 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-202ENST00000367740 MELKQ14680 651 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 NSUN5P1Q3KNT7 163 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 SPANXN4Q5MJ08 99 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 C8orf74Q6P047 294 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 LYPD2Q6UXB3 125 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 C1orf122Q6ZSJ8 110 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 VASH1Q7L8A9 365 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-202ENST00000367740 ZER1Q7Z7L7 766 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 KLHDC1Q8N7A1 406 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 ZNF566Q969W8 418 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 CCDC115Q96NT0 180 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 TSPYL1Q9H0U9 437 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 SIRPDQ9H106 197 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 ZNRD1Q9P1U0 126 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 PSMC3IPQ9P2W1 217 aaPredicted RBP12.09□□□□□ -0.47
VAMP4-202ENST00000367740 P2RX2Q9UBL9 471 aa12.09□□□□□ -0.47
VAMP4-202ENST00000367740 RNASEK-C17orf49H0YIS7 233 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 C3orf84H3BNL1 204 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 SURF4O15260 269 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 IGLL1P15814 213 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 ZNF32P17041 273 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 SLC6A2P23975 617 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 CDKN2CP42773 168 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 GDI2P50395 445 aaKnown RBP12.08□□□□□ -0.48
VAMP4-202ENST00000367740 DOC2BQ14184 412 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 RUNDC3AQ59EK9 446 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 ALG10BQ5I7T1 473 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 FAM201AQ5SY85 155 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 SLC35D2Q76EJ3 337 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 PTOV1Q86YD1 416 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 LSMEM1Q8N8F7 131 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 AKR7LQ8NHP1 331 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 TESCQ96BS2 214 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
VAMP4-202ENST00000367740 SEMA6AQ9H2E6 1030 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 POFUT1Q9H488 388 aa12.08□□□□□ -0.48
VAMP4-202ENST00000367740 HYDINQ4G0P3 5121 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 BTBD17A6NE02 478 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 ANKRD61A6NGH8 418 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 CCDC154A6NI56 674 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 IFNL4K9M1U5 179 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 TRIM13O60858 407 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 FSTL3O95633 263 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 ADORA3P0DMS8 318 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 CRISP3P54108 245 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms