RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 FNDC5Q8NAU1 212 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 ADPRHL1Q8NDY3 354 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 OR8J2Q8NGG1 315 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 PPP1R35Q8TAP8 253 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 ACMSDQ8TDX5 336 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 EPS8L3Q8TE67 593 aaKnown RBP7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 ITLN1Q8WWA0 313 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 POM121L2Q96KW2 1035 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 TMEM246Q9BRR3 403 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 PCGF1Q9BSM1 259 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 SEMA6AQ9H2E6 1030 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 B3GAT2Q9NPZ5 323 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 DCDC2Q9UHG0 476 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF443Q9Y2A4 671 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 DOCK11Q5JSL3 2073 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 TRAV36DV7A0A075B6V5 113 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 PRSS51A0A1B0GVH4 220 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 PLSCR5A0PG75 271 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 PLPP3O14495 311 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 AKAP8O43823 692 aaKnown RBP7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 FCN3O75636 299 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 SERPINI2O75830 405 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 CYB5R3P00387 301 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 IGLV1-40P01703 118 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 NR2F1P10589 423 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 CCNOP22674 350 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 GTF2E2P29084 291 aaKnown RBP7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 CHI3L1P36222 383 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 ERFP50548 548 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 MVDP53602 400 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 COPZ1P61923 177 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 PSG7Q13046 419 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 MOGQ16653 247 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF718Q3SXZ3 478 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 PABPC1L2AQ5JQF8 200 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 RNF220Q5VTB9 566 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 SLC35E4Q6ICL7 350 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 SLC27A4Q6P1M0 643 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 PEX5LQ8IYB4 626 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 RBM15BQ8NDT2 890 aaKnown RBP7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 TEX37Q96LM6 180 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 SAMD8Q96LT4 415 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 MMP28Q9H239 520 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 RNF121Q9H920 327 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 ACOXLQ9NUZ1 547 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 ARGLU1Q9NWB6 273 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 GLTPQ9NZD2 209 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 TBK1Q9UHD2 729 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZDHHC8Q9ULC8 765 aa7.01□□□□□ -1.29
HMGB1P39-201ENST00000366304 IGHV1-69DA0A0B4J2H0 117 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 IGHV3-64DA0A0J9YX35 117 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 A0A1B0GWA3 101 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF726A6NNF4 738 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 GSC2O15499 205 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 CHEK2O96017 543 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 IGHV1-69P01742 117 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 NQO1P15559 274 aaKnown RBP7□□□□□ -1.29
HMGB1P39-201ENST00000366304 RPS2P15880 293 aaKnown RBP7□□□□□ -1.29
HMGB1P39-201ENST00000366304 SLC6A2P23975 617 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 STOMP27105 288 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 PMELP40967 661 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 NAA20P61599 178 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 PPP1CBP62140 327 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 GNB2P62879 340 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 PRB3Q04118 309 aaPredicted RBP7□□□□□ -1.29
HMGB1P39-201ENST00000366304 PUDPQ08623 228 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 GNA13Q14344 377 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 MELKQ14680 651 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 LARS2Q15031 903 aaKnown RBP7□□□□□ -1.29
HMGB1P39-201ENST00000366304 LIN52Q52LA3 116 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 SPANXN4Q5MJ08 99 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 WDR25Q64LD2 544 aaPredicted RBP7□□□□□ -1.29
HMGB1P39-201ENST00000366304 TMEM53Q6P2H8 277 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 C1orf122Q6ZSJ8 110 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 SLC16A14Q7RTX9 510 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 PDZD9Q8IXQ8 264 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 LRRC18Q8N456 261 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 OR2Z1Q8NG97 314 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 AKR7LQ8NHP1 331 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF420Q8TAQ5 688 aaPredicted RBP7□□□□□ -1.29
HMGB1P39-201ENST00000366304 TBC1D15Q8TC07 691 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 SLC38A4Q969I6 547 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 C16orf45Q96MC5 204 aaPredicted RBP7□□□□□ -1.29
HMGB1P39-201ENST00000366304 WFDC6Q9BQY6 131 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 NANOGQ9H9S0 305 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 GCM1Q9NP62 436 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 SLC17A7Q9P2U7 560 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 PPP1R3CQ9UQK1 317 aa7□□□□□ -1.29
HMGB1P39-201ENST00000366304 IGKV1D-43A0A0B4J1Z2 117 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 C5orf49A4QMS7 147 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF879B4DU55 563 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 C11orf98E9PRG8 122 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 OR2T1O43869 369 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 QDPRP09417 244 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 PGA4P0DJD7 388 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 PGA3P0DJD8 388 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 ETFAP13804 333 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 IGLL1P15814 213 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 ALDH3A1P30838 453 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 CDAP32320 146 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms