RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 HIST1H2AAQ96QV6 131 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 SIGLEC11Q96RL6 698 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 UBE2J1Q9Y385 318 aaPredicted RBP12.66□□□□□ -0.38
COL6A1-201ENST00000361866 RPS10-NUDT3A0A1W2PQS6 291 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 NDUFB6O95139 128 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 LPLP06858 475 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 RD3LP0DJH9 198 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 RPS10P46783 165 aaKnown RBP12.66□□□□□ -0.38
COL6A1-201ENST00000361866 ACKR1Q16570 336 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 PHF19Q5T6S3 580 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 ZAR1Q86SH2 424 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 ADGRE4PQ86SQ3 457 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 TMEM59Q9BXS4 323 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 DEFB126Q9BYW3 111 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 GDE1Q9NZC3 331 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 ZNF629Q9UEG4 869 aaPredicted RBP12.66□□□□□ -0.38
COL6A1-201ENST00000361866 KIF25Q9UIL4 384 aa12.66□□□□□ -0.38
COL6A1-201ENST00000361866 SEC14L5O43304 696 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 POU3F2P20265 443 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-201ENST00000361866 SDHAP31040 664 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 C19orf57Q0VDD7 668 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 SULF2Q8IWU5 870 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 RFLNBQ8N5W9 214 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 OR10Z1Q8NGY1 313 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 ST7LQ8TDW4 575 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 PCYT1BQ9Y5K3 369 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-201ENST00000361866 ANK1P16157 1881 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 FAM230AA0A1W2PPH8 454 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 SEMA7AO75326 666 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 RAD51DO75771 328 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 IGHA1P01876 353 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 SERPINF1P36955 418 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 ADPRHP54922 357 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 TAS2R31P59538 309 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 RSU1Q15404 277 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 RAET1LQ5VY80 246 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 DMKNQ6E0U4 476 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-201ENST00000361866 OR52W1Q6IF63 320 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 FAM57BQ71RH2 274 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 HSD17B11Q8NBQ5 300 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 OR13H1Q8NG92 308 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 ASB17Q8WXJ9 295 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 TOE1Q96GM8 510 aaKnown RBP12.65□□□□□ -0.38
COL6A1-201ENST00000361866 GHITMQ9H3K2 345 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 PIGMQ9H3S5 423 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 ZNF160Q9HCG1 818 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 DSPPQ9NZW4 1301 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 LOC107986453A0A1B0GWG9 222 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 NPIPA2E9PIF3 369 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 NPIPA3F8WFD2 350 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 K7EPK0 472 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 NUDT21O43809 227 aaKnown RBP12.65□□□□□ -0.38
COL6A1-201ENST00000361866 GALR3O60755 368 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-201ENST00000361866 SULT1A3P0DMM9 295 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 SULT1A4P0DMN0 295 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 ZNF93P35789 620 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-201ENST00000361866 VN1R4Q7Z5H5 301 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 TMEM200AQ86VY9 491 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 RASGRP3Q8IV61 690 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 KCNRGQ8N5I3 272 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 FAM71E2Q8N5Q1 922 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 OR5T1Q8NG75 326 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 C14orf79Q96F83 325 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 C12orf57Q99622 126 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 CA10Q9NS85 328 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 OR52A1Q9UKL2 312 aa12.65□□□□□ -0.38
COL6A1-201ENST00000361866 KIR2DS5A0A0G2JLQ3 304 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 A0A0G2JNG1 304 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 KIR2DS3K7RE56 304 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 TBX19O60806 448 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 TMIGD3P0DMS9 266 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-201ENST00000361866 BLVRBP30043 206 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-201ENST00000361866 RABIFP47224 123 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 KIR2DS5Q14953 304 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 AVPI1Q5T686 147 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 AGBL4Q5VU57 503 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 ZNF595Q8IYB9 648 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 BCORP1Q8N888 145 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 C19orf47Q8N9M1 422 aaKnown RBP12.64□□□□□ -0.39
COL6A1-201ENST00000361866 PFDN5Q99471 154 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 GAREM1Q9H706 876 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 NIT2Q9NQR4 276 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 PLEK2Q9NYT0 353 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 SF3B6Q9Y3B4 125 aaKnown RBP12.64□□□□□ -0.39
COL6A1-201ENST00000361866 CEP250Q9BV73 2442 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 TMED7-TICAM2A0A0A6YYA0 188 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 CT62P0C5K7 136 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 PPA1Q15181 289 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 IAH1Q2TAA2 248 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-201ENST00000361866 GPR157Q5UAW9 335 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 TMEM71Q6P5X7 295 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 FJX1Q86VR8 437 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 OR14A16Q8NHC5 309 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 MCOLN1Q9GZU1 580 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 ELF5Q9UKW6 265 aaPredicted RBP12.64□□□□□ -0.39
COL6A1-201ENST00000361866 FOXJ3Q9UPW0 622 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 TMED7Q9Y3B3 224 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 ZNF831Q5JPB2 1677 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 A0A0B4J2E0 115 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 IGHV3-20A0A0C4DH32 117 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms