RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 TMEM43Q9BTV4 400 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 EMC6Q9BV81 110 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 STRADBQ9C0K7 418 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 TINAGL1Q9GZM7 467 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-202ENST00000359366 PPIL3Q9H2H8 161 aaKnown RBP4.58□□□□□ -1.68
ATXN3-202ENST00000359366 OR51M1Q9H341 326 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 WDR54Q9H977 334 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 NRIP3Q9NQ35 241 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 POLE4Q9NR33 117 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 MED17Q9NVC6 651 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 TXNL4BQ9NX01 149 aaKnown RBP4.58□□□□□ -1.68
ATXN3-202ENST00000359366 NDUFB11Q9NX14 153 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 MED29Q9NX70 200 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 AKAP7Q9P0M2 348 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-202ENST00000359366 IL17BQ9UHF5 180 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 PPIEQ9UNP9 301 aaKnown RBP4.58□□□□□ -1.68
ATXN3-202ENST00000359366 EXOGQ9Y2C4 368 aaKnown RBP4.58□□□□□ -1.68
ATXN3-202ENST00000359366 KLHDC2Q9Y2U9 406 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 PCDHGA5Q9Y5G8 931 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 CHCHD2Q9Y6H1 151 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-202ENST00000359366 APC2O95996 2303 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 A0A0G2JMP0 313 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TMEM129A0AVI4 362 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TMEM210A6NLX4 147 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF814B7Z6K7 855 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 AKAP8O43823 692 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 DOK2O60496 412 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 RAMP1O60894 148 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 RPP14O95059 124 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TNFSF15O95150 251 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 AKR7A3O95154 331 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 MPZL1O95297 269 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ONECUT2O95948 504 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 IFNGP01579 166 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 CRYABP02511 175 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 CD14P08571 375 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 IL7P13232 177 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 CPEP16870 476 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 PSMA1P25786 263 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 SDC2P34741 201 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 DNASE1L1P49184 302 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 FMODQ06828 376 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 C17orf67Q0P5P2 114 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 MLLT11Q13015 90 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 EFR3AQ14156 821 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TRIP6Q15654 476 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 SSX2Q16385 188 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ACKR1Q16570 336 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 MEP1BQ16820 701 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 DGUOKQ16854 277 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ODF4Q2M2E3 257 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 HSD17B12Q53GQ0 312 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 RPL13AP3Q6NVV1 102 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 C19orf48Q6RUI8 117 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF782Q6ZMW2 699 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 LRRC69Q6ZNQ3 347 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 GRINAQ7Z429 371 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 SYT9Q86SS6 491 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 OR6V1Q8N148 313 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TMEM156Q8N614 296 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 POC1BQ8TC44 478 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ASB15Q8WXK1 588 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 HSD17B8Q92506 261 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ALX4Q9H161 411 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TSPAN10Q9H1Z9 355 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 WDR76Q9H967 626 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 BIN3Q9NQY0 253 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 C19orf12Q9NSK7 152 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 MRPS18AQ9NVS2 196 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 GRHPRQ9UBQ7 328 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 STUB1Q9UNE7 303 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 GAB2Q9UQC2 676 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 HIF3AQ9Y2N7 669 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 KCNK7Q9Y2U2 307 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 EXOSC1Q9Y3B2 195 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 WIF1Q9Y5W5 379 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ACACAQ13085 2346 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ZZEF1O43149 2961 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TRAV36DV7A0A075B6V5 113 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 LOC102723996A0A087X1L8 192 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 IGHV3-15A0A0B4J1V0 119 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 LOC101059948A0A1B0GTJ6 334 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TUBAL3A6NHL2 446 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 SLC22A31A6NKX4 558 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF729A6NN14 1252 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 A8MVM7 634 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 B4E171 279 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 I3L521 148 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 RGS5O15539 181 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 NPIPB7O75200 414 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TRIM3O75382 744 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 DKK1O94907 266 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 DLSTP36957 453 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 HTR3AP46098 478 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF41P51814 821 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 PRPS1P60891 318 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 IFITM3Q01628 133 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 HNRNPA0Q13151 305 aaKnown RBP4.57□□□□□ -1.68
ATXN3-202ENST00000359366 TNK1Q13470 666 aa4.57□□□□□ -1.68
ATXN3-202ENST00000359366 ZSWIM7Q19AV6 140 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms