RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 OSGIN2Q9Y236 505 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 CNMDO75829 334 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 RPL29P47914 159 aaKnown RBP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 OR4F5Q8NH21 305 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 MRPS24Q96EL2 167 aaKnown RBP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 OR4F4Q96R69 305 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 SIDT1Q9NXL6 827 aaKnown RBP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 MRPS28Q9Y2Q9 187 aaKnown RBP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 ELLP55199 621 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 SLC7A9P82251 487 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 CALHM3Q86XJ0 350 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 OR2L13Q8N349 312 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM59Q9BXS4 323 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 PLEKHA2Q9HB19 425 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 IL17BQ9UHF5 180 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 APOA2P02652 100 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 OR4E1P0C645 316 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 HNRNPKP61978 463 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 TXNDC8Q6A555 127 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 GDPD4Q6W3E5 623 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 GALNT16Q8N428 558 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 LMNTD1Q8N9Z9 388 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 NECAP1Q8NC96 275 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 CYB5D2Q8WUJ1 264 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 DDA1Q9BW61 102 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 ZCCHC4Q9H5U6 513 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 PADI3Q9ULW8 664 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 GPR55Q9Y2T6 319 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 GBF1Q92538 1859 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 NPIPA5A0A0B4J1W7 369 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 ADRA2CP18825 462 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 OR7E24Q6IFN5 339 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 ETV3LQ6ZN32 361 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 GPX8Q8TED1 209 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 LRIG1Q96JA1 1093 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 CHST8Q9H2A9 424 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 TIAM2Q8IVF5 1701 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 DCCP43146 1447 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 ASPDHA6ND91 283 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 TARM1B6A8C7 271 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 APEHP13798 732 aaKnown RBP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 TBPP20226 339 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 CCKARP32238 428 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 SLC36A2Q495M3 483 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 SLC35D2Q76EJ3 337 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF429Q86V71 674 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM255BQ8WV15 326 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 GNPNAT1Q96EK6 184 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 CREBZFQ9NS37 354 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 AIFM1O95831 613 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 NNATQ16517 81 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 KLHDC8AQ8IYD2 350 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 SYS1Q8N2H4 156 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 SECTM1Q8WVN6 248 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 GSN-AS1Q9NRJ2 163 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 FTSJ1Q9UET6 329 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 GPR160Q9UJ42 338 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 FEZF1A0PJY2 475 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF724A8MTY0 619 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 CCL16O15467 120 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 SYT9Q86SS6 491 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 RNF175Q8N4F7 328 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 MTMR14Q8NCE2 650 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 EXTL1Q92935 676 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 SMIM19Q96E16 107 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 TEPSINQ96N21 525 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 LAMP3Q9UQV4 416 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 RHBDD3Q9Y3P4 386 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 MLF1P58340 268 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 PRRT3Q5FWE3 981 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 FAM71E1Q6IPT2 247 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 OR4N5Q8IXE1 308 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 SLC22A24Q8N4F4 322 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 FAM24BQ8N5W8 94 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 ATOH1Q92858 354 aaPredicted RBP5.59□□□□□ -1.52
VPS13B-203ENST00000358544 USP36Q9P275 1121 aaKnown RBP5.59□□□□□ -1.52
VPS13B-203ENST00000358544 ADAM29Q9UKF5 820 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 SFTPDP35247 375 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 KRTDAPP60985 99 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 LBX2Q6XYB7 198 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 GPR87Q9BY21 358 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 CXorf36Q9H7Y0 433 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 UBR2Q8IWV8 1755 aa5.59□□□□□ -1.52
VPS13B-203ENST00000358544 TRAV34A0A0B4J273 112 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 FURINP09958 794 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 PLCXD2Q0VAA5 305 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 MSMO1Q15800 293 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 CNKSR3Q6P9H4 555 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 GCDHQ92947 438 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 NPIPA2E9PIF3 369 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 PTP4A3O75365 173 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 GPNMBQ14956 572 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 AADACL3Q5VUY0 350 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 FAM219BQ5XKK7 198 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 PSRC1Q6PGN9 363 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 KCNIP2Q9NS61 270 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 CXXC1Q9P0U4 656 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 XRCC3O43542 346 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 SELENOFO60613 162 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms