RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PCSK6P29122 969 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 RPL35P42766 123 aaKnown RBP10.76□□□□□ -0.69
COL9A1-202ENST00000357250 ETV1P50549 477 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 SELENBP1Q13228 472 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 CTU2Q2VPK5 515 aaKnown RBP10.76□□□□□ -0.69
COL9A1-202ENST00000357250 PARM1Q6UWI2 310 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 ALKAL2Q6UX46 152 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 MARCH3Q86UD3 253 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 LIPHQ8WWY8 451 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 SEC22CQ9BRL7 303 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 TMEM43Q9BTV4 400 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 A0A1B0GTL3 188 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 AIPO00170 330 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 BET1O15155 118 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 FBXO24O75426 580 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 SNRNP70P08621 437 aaKnown RBP10.75□□□□□ -0.69
COL9A1-202ENST00000357250 SELEP16581 610 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 PMPCAQ10713 525 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 IAH1Q2TAA2 248 aaPredicted RBP10.75□□□□□ -0.69
COL9A1-202ENST00000357250 ZNF750Q32MQ0 723 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 GLIPR1L1Q6UWM5 242 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 TMEM200AQ86VY9 491 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 OR6K3Q8NGY3 331 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 GNG12Q9UBI6 72 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 DLEC1Q9Y238 1755 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 A6NL46 340 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 SBK3P0C264 359 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 PRR35P0CG20 571 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 ABOP16442 354 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 SPI1P17947 270 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 SUMO3P55854 103 aaPredicted RBP10.75□□□□□ -0.69
COL9A1-202ENST00000357250 UBE2KP61086 200 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 RAB11AP62491 216 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 ZNF385BQ569K4 471 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 THEM4Q5T1C6 240 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 SLAMF9Q96A28 289 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 PIGMQ9H3S5 423 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 PCDHB10Q9UN67 800 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 ARFGEF1Q9Y6D6 1849 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 AGAP14A8MT82 685 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 SELENOFO60613 162 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 OR2F2O95006 317 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 TSPAN12O95859 305 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 B3GALT4O96024 378 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 PTGER4P35408 488 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 OR2F1Q13607 317 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 IL10RAQ13651 578 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 FAM122BQ7Z309 247 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 ANGPTL5Q86XS5 388 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 PTOV1Q86YD1 416 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 RBM45Q8IUH3 476 aaKnown RBP10.75□□□□□ -0.69
COL9A1-202ENST00000357250 SEMA6DQ8NFY4 1073 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 OR4D6Q8NGJ1 314 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 PKMYT1Q99640 499 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 GSX2Q9BZM3 304 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 ZNF576Q9H609 170 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 EXOSC3Q9NQT5 275 aaKnown RBP10.75□□□□□ -0.69
COL9A1-202ENST00000357250 OR14J1Q9UGF5 321 aa10.75□□□□□ -0.69
COL9A1-202ENST00000357250 hCG_1809904A0A1W2PP81 198 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 A0A1W2PPE2 198 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 A0A1W2PR64 198 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 A0A1W2PRV1 198 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 IMPA2O14732 288 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 FUCA1P04066 466 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 PNLIPRP2P54317 469 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 HSF1Q00613 529 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 SFRP5Q5T4F7 317 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 PTCRAQ6ISU1 281 aaPredicted RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 ACSM5Q6NUN0 579 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 LINC00346Q8IVM7 164 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 BCORP1Q8N888 145 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 BBS1Q8NFJ9 593 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 PFN4Q8NHR9 129 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 C3orf49Q96BT1 292 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 SMIM19Q96E16 107 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 PLEKHF2Q9H8W4 249 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 B3GALT5Q9Y2C3 310 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 MRPS2Q9Y399 296 aaKnown RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 GLYR1Q49A26 553 aaPredicted RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 SOHLH1Q5JUK2 328 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 RNLSQ5VYX0 342 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 SLC30A7Q8NEW0 376 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 NT5CQ8TCD5 201 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 SECTM1Q8WVN6 248 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 DAZAP1Q96EP5 407 aaKnown RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 ZNF845Q96IR2 970 aaPredicted RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 TEX101Q9BY14 249 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 COA3Q9Y2R0 106 aaPredicted RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 SERTM1A2A2V5 107 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 TSTD3H0UI37 97 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 PLRG1O43660 514 aaKnown RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 TIMM8AO60220 97 aaPredicted RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 FGF17O60258 216 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 GPX5O75715 221 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 HEPHL1Q6MZM0 1159 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 PCED1AQ9H1Q7 454 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 A0A0B4J2A0 478 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 M0R082 166 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 SGCEO43556 437 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms