RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ANKDD1AQ495B1 522 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 KLHL12Q53G59 568 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 SFRP5Q5T4F7 317 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 JAZF1Q86VZ6 243 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 LINC00346Q8IVM7 164 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 PAQR4Q8N4S7 273 aaPredicted RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 DHRSXQ8N5I4 330 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 PACRGLQ8N7B6 248 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 OR4F15Q8NGB8 312 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 OR10S1Q8NGN2 331 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 OR52N5Q8NH56 324 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 TMEM163Q8TC26 289 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 PPP1R14AQ96A00 147 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 RNF166Q96A37 237 aaPredicted RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZNF582Q96NG8 517 aaPredicted RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZNF416Q9BWM5 594 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 SFXN3Q9BWM7 321 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 IMPAD1Q9NX62 359 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 NPAP1Q9NZP6 1156 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 EMC3Q9P0I2 261 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 COPS3Q9UNS2 423 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 RCE1Q9Y256 329 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 LHFPL6Q9Y693 200 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 J3QKU1 62 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 DVL2O14641 736 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 RER1O15258 196 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 COX5AP20674 150 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 GSTT1P30711 240 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 CHRNB4P30926 498 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 OPRM1P35372 400 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 UGT2B10P36537 528 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 CAPGP40121 348 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 DAP3P51398 398 aaKnown RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 PRSS12P56730 875 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 CLRN1P58418 232 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 HGFACQ04756 655 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 APOFQ13790 326 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 ENDOGQ14249 297 aaKnown RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 MAD2L1BPQ15013 274 aaPredicted RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 TAB1Q15750 504 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 STK11Q15831 433 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 TMEM211Q6ICI0 200 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 OR2A2Q6IF42 318 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 CXXC5Q7LFL8 322 aaKnown RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZNF555Q8NEP9 628 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 SLC26A10Q8NG04 563 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 FBLIM1Q8WUP2 373 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 C11orf40Q8WZ69 217 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 BCL2L2Q92843 193 aaPredicted RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZC3HAV1LQ96H79 300 aaKnown RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 MAP6Q96JE9 813 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 CNBD2Q96M20 576 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZNF184Q99676 751 aaPredicted RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 ULBP2Q9BZM5 246 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 BATF3Q9NR55 127 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 PROCRQ9UNN8 238 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 USF3Q68DE3 2245 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 MAST4O15021 2626 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 A0A1B0GUH1 482 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 HSPB2A8KAH6 182 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 RPL36A-HNRNPH2H7BZ11 118 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 J3QRE1 110 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 MSTNO14793 375 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 SLC43A1O75387 559 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 HTR1AP08908 422 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 DBHP09172 617 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 MMP7P09237 267 aaPredicted RBP3.51□□□□□ -1.85
LIG4-201ENST00000356922 C21orf33P30042 268 aaPredicted RBP3.51□□□□□ -1.85
LIG4-201ENST00000356922 GRK5P34947 590 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 NAA10P41227 235 aaPredicted RBP3.51□□□□□ -1.85
LIG4-201ENST00000356922 RAD23AP54725 363 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 HNRNPA0Q13151 305 aaKnown RBP3.51□□□□□ -1.85
LIG4-201ENST00000356922 HSPB2Q16082 182 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 SGCAQ16586 387 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 THEM4Q5T1C6 240 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 C10orf128Q5T292 105 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 GPR139Q6DWJ6 353 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 CFAP77Q6ZQR2 320 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 PLEKHG7Q6ZR37 379 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 SPATC1Q76KD6 591 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 DPY19L4Q7Z388 723 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 TIGD4Q8IY51 512 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 GPR137CQ8N3F9 429 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 SLC22A24Q8N4F4 322 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 OR6K6Q8NGW6 343 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 FOXB1Q99853 325 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 ALG12Q9BV10 488 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 GP6Q9HCN6 339 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 GLRX2Q9NS18 164 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 TMEM38BQ9NVV0 291 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 PARPBPQ9NWS1 579 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 B3GNT2Q9NY97 397 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 LRRC42Q9Y546 428 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 A0A1W2PPL8 197 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 ZNF99A8MXY4 864 aaPredicted RBP3.51□□□□□ -1.85
LIG4-201ENST00000356922 PRR23D1E9PI22 279 aaPredicted RBP3.51□□□□□ -1.85
LIG4-201ENST00000356922 CASKO14936 926 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 IDH3BO43837 385 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 DOK2O60496 412 aa3.51□□□□□ -1.85
LIG4-201ENST00000356922 PRR23D2P0DMB1 279 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms