RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 NDRG3Q9UGV2 375 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 CCDC88AQ3V6T2 1871 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 ST8SIA3O43173 380 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 CYC1P08574 325 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 RAD52P43351 418 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 NKX2-1P43699 371 aaPredicted RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 GPR12P47775 334 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 HYAL4Q2M3T9 481 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 SAXO2Q658L1 398 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 KDM4DQ6B0I6 523 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 KMT5CQ86Y97 462 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 EGFL6Q8IUX8 553 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 LAX1Q8IWV1 398 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 OR5D18Q8NGL1 313 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 ST8SIA1Q92185 356 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 FAM122AQ96E09 287 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 S1PR3Q99500 378 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 SYT11Q9BT88 431 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 RNF32Q9H0A6 362 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 TAF9BQ9HBM6 251 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 RANGRFQ9HD47 186 aaPredicted RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 DLL4Q9NR61 685 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 MYH2Q9UKX2 1941 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 TMEM129A0AVI4 362 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 ST8SIA5O15466 376 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 PRICKLE3O43900 615 aaPredicted RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 TRAPPC2P0DI81 140 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 TRAPPC2BP0DI82 140 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 EN2P19622 333 aaPredicted RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 CD1CP29017 333 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 SOX18P35713 384 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 NOVA1P51513 510 aaKnown RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 GPR85P60893 370 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 ERHP84090 104 aaKnown RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 HSF1Q00613 529 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 ALKAL2Q6UX46 152 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 LINC00299Q6ZSB3 139 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 ANGPTL5Q86XS5 388 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 OR1M1Q8NGA1 313 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 MARC2Q969Z3 335 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 PIGMQ9H3S5 423 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 CXXC1Q9P0U4 656 aaPredicted RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 DHCR7Q9UBM7 475 aaKnown RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 ATP23Q9Y6H3 246 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 A6NIN4 97 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 FIGNL2A6NMB9 653 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 GALR2O43603 387 aaPredicted RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 EDN3P14138 238 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 EGR3Q06889 387 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 ACOT6Q3I5F7 207 aaPredicted RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 AFMIDQ63HM1 303 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 FAM122CQ6P4D5 195 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 TBPL2Q6SJ96 375 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 TMEM217Q8N7C4 229 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 NHLRC2Q8NBF2 726 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 FAM71CQ8NEG0 241 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 OR2G3Q8NGZ4 309 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 LKAAEAR1Q8TD35 194 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 TRIB1Q96RU8 372 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 QPCTLQ9NXS2 382 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 C19orf53Q9UNZ5 99 aaPredicted RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 CTDSP2O14595 271 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 CHEK1O14757 476 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 ABLIM3O94929 683 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 CLDN12P56749 244 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 OR1D5P58170 312 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 SLC35A2P78381 396 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 DOC2BQ14184 412 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 TESK1Q15569 626 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 KHDC1LQ5JSQ8 128 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 METRNLQ641Q3 311 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 USP51Q70EK9 711 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 KCNRGQ8N5I3 272 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 OR13H1Q8NG92 308 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 MVB12AQ96EY5 273 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 C1QTNF3Q9BXJ4 246 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 SLC35D1Q9NTN3 355 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 COA3Q9Y2R0 106 aaPredicted RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 SNX11Q9Y5W9 270 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 SLCO1B1Q9Y6L6 691 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 IGLV3-10A0A075B6K4 115 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 PPP1R2P9O14990 202 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 LALBAP00709 142 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 GIPP09681 153 aaPredicted RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 BMP1P13497 986 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 GLULP15104 373 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 RPL13AP40429 203 aaKnown RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 SRP9P49458 86 aaKnown RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 PFN3P60673 137 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 DPTQ07507 201 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 OTUD1Q5VV17 481 aaPredicted RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 NLRC3Q7RTR2 1065 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 RETREG3Q86VR2 466 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 LSRQ86X29 649 aaPredicted RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 PGBD5Q8N414 524 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 OR13F1Q8NGS4 319 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 CCDC74AQ96AQ1 378 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 ZNF775Q96BV0 537 aaPredicted RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 FAM117AQ9C073 453 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 AMBRA1Q9C0C7 1298 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms