RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ARNTP27540 789 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 PPT1P50897 306 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 NAA40Q86UY6 237 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 FJX1Q86VR8 437 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 MORN4Q8NDC4 146 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 PDCD1LG2Q9BQ51 273 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 TPPP3Q9BW30 176 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 PLEKHF2Q9H8W4 249 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 CLEC2DQ9UHP7 191 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 ZNF705GA8MUZ8 300 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-202ENST00000355480 HMGN4O00479 90 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 TBXA2RP21731 343 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 NME2P22392 152 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 FAPQ12884 760 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 IL34Q6ZMJ4 242 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 OR51A2Q8NGJ7 313 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 TXN2Q99757 166 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 H0YIG0 161 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 DUSP2Q05923 314 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 CMTM2Q8TAZ6 248 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 EDEM2Q9BV94 578 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 COL16A1Q07092 1604 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-202ENST00000355480 RPS10-NUDT3A0A1W2PQS6 291 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 DSCR3O14972 297 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 HLA-DOBP13765 273 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 RPS10P46783 165 aaKnown RBP16.49■□□□□ 0.23
COL18A1-202ENST00000355480 GABRA4P48169 554 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 MRPL19P49406 292 aaKnown RBP16.49■□□□□ 0.23
COL18A1-202ENST00000355480 WDR88Q6ZMY6 472 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 WFDC8Q8IUA0 241 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 KLHDC8BQ8IXV7 354 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 BCL7CQ8WUZ0 217 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-202ENST00000355480 LRP5LA4QPB2 252 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 LINC01565O15544 149 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 PLRG1O43660 514 aaKnown RBP16.49■□□□□ 0.23
COL18A1-202ENST00000355480 ICOSLGO75144 302 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 ACHEP22303 614 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 ECI1P42126 302 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 PGFP49763 221 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 RBP2P50120 134 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.49■□□□□ 0.23
COL18A1-202ENST00000355480 DHRS4L2Q6PKH6 230 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 MYO18AQ92614 2054 aaKnown RBP16.49■□□□□ 0.23
COL18A1-202ENST00000355480 IGHV3-64DA0A0J9YX35 117 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 TRDV1A0A1B0GX56 115 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 THBS1P07996 1170 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 MYBPHQ13203 477 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 SELENBP1Q13228 472 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 EGFL6Q8IUX8 553 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 CCDC74BQ96LY2 380 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 LYSMD1Q96S90 227 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 TEAD3Q99594 435 aa16.49■□□□□ 0.23
COL18A1-202ENST00000355480 TMPRSS11DO60235 418 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 CLEC2LP0C7M8 214 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 CATSPERDQ86XM0 798 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 CA13Q8N1Q1 262 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 EXO1Q9UQ84 846 aaKnown RBP16.48■□□□□ 0.23
COL18A1-202ENST00000355480 C2CD4DB7Z1M9 353 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 M0R1B8 84 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 PPICP45877 212 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 XKR7Q5GH72 579 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 FCRL6Q6DN72 434 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 MAFAQ8NHW3 353 aaPredicted RBP16.48■□□□□ 0.23
COL18A1-202ENST00000355480 OR51E1Q8TCB6 317 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 ISL2Q96A47 359 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 MKRN2Q9H000 416 aaKnown RBP16.48■□□□□ 0.23
COL18A1-202ENST00000355480 ACOXLQ9NUZ1 547 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 RBFOX1Q9NWB1 397 aaKnown RBP16.48■□□□□ 0.23
COL18A1-202ENST00000355480 ASH2LQ9UBL3 628 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 FOLR1P15328 257 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 GLB1P16278 677 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 KCNJ8Q15842 424 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 NUDT8Q8WV74 236 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 MED18Q9BUE0 208 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 ARV1Q9H2C2 271 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 TRGV8A0A0C4DH27 118 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 F6UZH7 168 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 IGFBP6P24592 240 aaPredicted RBP16.48■□□□□ 0.23
COL18A1-202ENST00000355480 SNRPGP62308 76 aaKnown RBP16.48■□□□□ 0.23
COL18A1-202ENST00000355480 LGI3Q8N145 548 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 OR1S2Q8NGQ3 325 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 OR11A1Q9GZK7 315 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 LAT2Q9GZY6 243 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 TOPAZ1Q8N9V7 1692 aa16.48■□□□□ 0.23
COL18A1-202ENST00000355480 IMPA2O14732 288 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 SOD1P00441 154 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 ATP1B1P05026 303 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 ELK1P19419 428 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 RAB13P51153 203 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 RAC1P63000 192 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 SPEM1Q8N4L4 309 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 OR51H1Q8NH63 302 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 KIR2DS1A0A191URI9 304 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 LCMT2O60294 686 aaKnown RBP16.47■□□□□ 0.23
COL18A1-202ENST00000355480 CRYAAP02489 173 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 CSF3P09919 207 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 PRPH2P23942 346 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 KIR2DS4P43632 304 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 MRPL58Q14197 206 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms