RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 RAD52P43351 418 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 RPS27AP62979 156 aaKnown RBP16.82■□□□□ 0.28
SPNS1-204ENST00000352260 UBA52P62987 128 aaKnown RBP16.82■□□□□ 0.28
SPNS1-204ENST00000352260 E2F1Q01094 437 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 NHLH1Q02575 133 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 POU4F2Q12837 409 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 RNASE12Q5GAN4 147 aaKnown RBP16.82■□□□□ 0.28
SPNS1-204ENST00000352260 SFRP4Q6FHJ7 346 aaPredicted RBP16.82■□□□□ 0.28
SPNS1-204ENST00000352260 OR5M10Q6IEU7 315 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 UQCC3Q6UW78 93 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 APCDD1LQ8NCL9 501 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 PXT1Q8NFP0 134 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 FCAMRQ8WWV6 532 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 METTL21AQ8WXB1 218 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 LRRC46Q96FV0 321 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 SPSB2Q99619 263 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 NKX6-2Q9C056 277 aaPredicted RBP16.82■□□□□ 0.28
SPNS1-204ENST00000352260 ARL6Q9H0F7 186 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 AUNIPQ9H7T9 357 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 BEX1Q9HBH7 125 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 HAO2Q9NYQ3 351 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 FLVCR2Q9UPI3 526 aa16.82■□□□□ 0.28
SPNS1-204ENST00000352260 ZC3H12DA2A288 527 aaKnown RBP16.81■□□□□ 0.28
SPNS1-204ENST00000352260 RIIAD1A6NNX1 92 aa16.81■□□□□ 0.28
SPNS1-204ENST00000352260 C17orf51A8MQB3 221 aa16.81■□□□□ 0.28
SPNS1-204ENST00000352260 PRSS44E7EML9 344 aa16.81■□□□□ 0.28
SPNS1-204ENST00000352260 NUPL2O15504 423 aaKnown RBP16.81■□□□□ 0.28
SPNS1-204ENST00000352260 NDUFB2O95178 105 aa16.81■□□□□ 0.28
SPNS1-204ENST00000352260 APOC1P02654 83 aa16.81■□□□□ 0.28
SPNS1-204ENST00000352260 SLC6A8P48029 635 aa16.81■□□□□ 0.28
SPNS1-204ENST00000352260 SLC3A1Q07837 685 aa16.81■□□□□ 0.28
SPNS1-204ENST00000352260 TRA2AQ13595 282 aaKnown RBP eCLIP16.81■□□□□ 0.28
SPNS1-204ENST00000352260 SFRP5Q5T4F7 317 aa16.81■□□□□ 0.28
SPNS1-204ENST00000352260 ZNF660Q6AZW8 331 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-204ENST00000352260 C17orf107Q6ZR85 190 aa16.81■□□□□ 0.28
SPNS1-204ENST00000352260 SMAP2Q8WU79 429 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-204ENST00000352260 KISS1RQ969F8 398 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-204ENST00000352260 WDR77Q9BQA1 342 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-204ENST00000352260 SEC22CQ9BRL7 303 aa16.81■□□□□ 0.28
SPNS1-204ENST00000352260 ASCC3Q8N3C0 2202 aaKnown RBP16.81■□□□□ 0.28
SPNS1-204ENST00000352260 OGG1O15527 345 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 HCRTR2O43614 444 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 KHDRBS3O75525 346 aaKnown RBP16.8■□□□□ 0.28
SPNS1-204ENST00000352260 RAB40ALP0C0E4 278 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 ZFP36L1Q07352 338 aaKnown RBP16.8■□□□□ 0.28
SPNS1-204ENST00000352260 IL11RAQ14626 422 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 TCEAL6Q6IPX3 200 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 ARHGAP11AQ6P4F7 1023 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 PAPD4Q6PIY7 484 aaKnown RBP16.8■□□□□ 0.28
SPNS1-204ENST00000352260 LINGO2Q7L985 606 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 ZNF563Q8TA94 476 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 RAB40AQ8WXH6 277 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 TCEAL3Q969E4 200 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 TBL1XR1Q9BZK7 514 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 SLC26A1Q9H2B4 701 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 ZMIZ1Q9ULJ6 1067 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 ZNF337Q9Y3M9 751 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 F8W036 122 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 FADS1O60427 444 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 EIF4E2O60573 245 aaKnown RBP16.8■□□□□ 0.28
SPNS1-204ENST00000352260 IGF2P01344 180 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 ZNF3P17036 446 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 CRMP1Q14194 572 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 ATRAIDQ6UW56 229 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 C16orf47Q6ZP98 133 aaPredicted RBP16.8■□□□□ 0.28
SPNS1-204ENST00000352260 CMTM4Q8IZR5 234 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 DNAAF1Q8NEP3 725 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 OR10H4Q8NGA5 316 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 ZNF671Q8TAW3 534 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 NSMAFQ92636 917 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 CRB3Q9BUF7 120 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 AKIRIN1Q9H9L7 192 aaPredicted RBP16.8■□□□□ 0.28
SPNS1-204ENST00000352260 CHRNA9Q9UGM1 479 aa16.8■□□□□ 0.28
SPNS1-204ENST00000352260 MCIDASD6RGH6 385 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 TEX46H3BTG2 121 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 ARPC5O15511 151 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 GMFGO60234 142 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 PLATP00750 562 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 NAT2P11245 290 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 ZNF28P17035 718 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 NOS3P29474 1203 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 FAUP35544 74 aaKnown RBP16.79■□□□□ 0.28
SPNS1-204ENST00000352260 MPLP40238 635 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 MRPL14Q6P1L8 145 aaKnown RBP16.79■□□□□ 0.28
SPNS1-204ENST00000352260 RAB11FIP2Q7L804 512 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 CPEB2Q7Z5Q1 589 aaKnown RBP16.79■□□□□ 0.28
SPNS1-204ENST00000352260 AGBL5Q8NDL9 886 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 GHSRQ92847 366 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 C4orf36Q96KX1 117 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 C12orf57Q99622 126 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 ADAM19Q9H013 955 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 ARRDC1-AS1Q9H2J1 176 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 NRIP3Q9NQ35 241 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 ST6GALNAC2Q9UJ37 374 aa16.79■□□□□ 0.28
SPNS1-204ENST00000352260 ZNF879B4DU55 563 aa16.78■□□□□ 0.28
SPNS1-204ENST00000352260 E9PI62 339 aa16.78■□□□□ 0.28
SPNS1-204ENST00000352260 F5H5P2 479 aa16.78■□□□□ 0.28
SPNS1-204ENST00000352260 ACOT7O00154 380 aa16.78■□□□□ 0.28
SPNS1-204ENST00000352260 IFNGP01579 166 aa16.78■□□□□ 0.28
SPNS1-204ENST00000352260 SBK2P0C263 348 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms