RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 RAB40AQ8WXH6 277 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 THOC1Q96FV9 657 aaKnown RBP13.15□□□□□ -0.3
COPE-202ENST00000349893 PKNOX2Q96KN3 472 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 SIAEQ9HAT2 523 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 TMEM27Q9HBJ8 222 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 EIF3KQ9UBQ5 218 aaKnown RBP13.15□□□□□ -0.3
COPE-202ENST00000349893 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.15□□□□□ -0.3
COPE-202ENST00000349893 DOCK11Q5JSL3 2073 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 KIR2DS1A0A191URI9 304 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 C5orf49A4QMS7 147 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 BIRC5O15392 142 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 OR6A2O95222 327 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 ANP32DO95626 131 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 HOXB9P17482 250 aaPredicted RBP13.14□□□□□ -0.31
COPE-202ENST00000349893 CCNOP22674 350 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 ZNF84P51523 738 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 NCALDP61601 193 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 PPP1CBP62140 327 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 MRPS34P82930 218 aaKnown RBP13.14□□□□□ -0.31
COPE-202ENST00000349893 MELKQ14680 651 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 ZNF74Q16587 644 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 Q6ZPA2 131 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 LRRC18Q8N456 261 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 HIPK4Q8NE63 616 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 ZDHHC16Q969W1 377 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 NABP1Q96AH0 204 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 FAM71F1Q96KD3 344 aaPredicted RBP13.14□□□□□ -0.31
COPE-202ENST00000349893 WFDC6Q9BQY6 131 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 SLC30A2Q9BRI3 323 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 MARCH7Q9H992 704 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 SLCO1B3Q9NPD5 702 aa13.14□□□□□ -0.31
COPE-202ENST00000349893 C5orf63A6NC05 138 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 TMEM178BH3BS89 294 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 ERLIN1O75477 346 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 FSTL3O95633 263 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 MELTFP08582 738 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 ZNF32P17041 273 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 SLC1A6P48664 564 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 PSG7Q13046 419 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 ZNF620Q6ZNG0 422 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 ZER1Q7Z7L7 766 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 NOXO1Q8NFA2 376 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 ABHD4Q8TB40 342 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 DYRK2Q92630 601 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 ITCHQ96J02 903 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 ZNF347Q96SE7 839 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 SPATA5L1Q9BVQ7 753 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 RAD21L1Q9H4I0 556 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 RMND5AQ9H871 391 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 EVA1AQ9H8M9 152 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 NANOGQ9H9S0 305 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 ASH2LQ9UBL3 628 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 IL19Q9UHD0 177 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 UGT2A1Q9Y4X1 527 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 TENM3Q9P273 2699 aa13.13□□□□□ -0.31
COPE-202ENST00000349893 COL7A1Q02388 2944 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 C5orf58C9J3I9 102 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 RNF13O43567 381 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 FMO6PO60774 539 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 SLC22A3O75751 556 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 ASAH2BP0C7U1 165 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 TNFSF4P23510 183 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 GDI2P50395 445 aaKnown RBP13.12□□□□□ -0.31
COPE-202ENST00000349893 RGS8P57771 180 aaPredicted RBP13.12□□□□□ -0.31
COPE-202ENST00000349893 CLRN1P58418 232 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 PSG4Q00888 419 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 ZNF613Q6PF04 617 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 Q6ZR03 302 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 VANGL1Q8TAA9 524 aaPredicted RBP13.12□□□□□ -0.31
COPE-202ENST00000349893 C10orf82Q8WW14 230 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 NMD3Q96D46 503 aaKnown RBP13.12□□□□□ -0.31
COPE-202ENST00000349893 PAIP1Q9H074 479 aaKnown RBP13.12□□□□□ -0.31
COPE-202ENST00000349893 SMURF2Q9HAU4 748 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 CCNB1IP1Q9NPC3 277 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 MAN2C1Q9NTJ4 1040 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 ZNF229Q9UJW7 825 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 PPP1R3CQ9UQK1 317 aa13.12□□□□□ -0.31
COPE-202ENST00000349893 DNAH3Q8TD57 4116 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 WDR91A4D1P6 747 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 PRORSD1PA6NEY8 169 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 IFNL4K9M1U5 179 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 CLIC1O00299 241 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 TNFRSF13BO14836 293 aaPredicted RBP13.11□□□□□ -0.31
COPE-202ENST00000349893 PIN1P1O15428 100 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 CHP2O43745 196 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 IDO1P14902 403 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 C2orf68Q2NKX9 166 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 HHATQ5VTY9 493 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 REEP3Q6NUK4 255 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 REC114Q7Z4M0 266 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 RANBP3LQ86VV4 465 aaPredicted RBP13.11□□□□□ -0.31
COPE-202ENST00000349893 KRT73Q86Y46 540 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 KLBQ86Z14 1044 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 FITM2Q8N6M3 262 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 AKR7LQ8NHP1 331 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 SSMEM1Q8WWF3 244 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 GTF2H4Q92759 462 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 ZNF607Q96SK3 696 aa13.11□□□□□ -0.31
COPE-202ENST00000349893 ZNF426Q9BUY5 554 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms