RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 RFLNBQ8N5W9 214 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 NR1H4Q96RI1 486 aaPredicted RBP16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 FOXB1Q99853 325 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 SCN3BQ9NY72 215 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 COPS3Q9UNS2 423 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 KLHDC2Q9Y2U9 406 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 TENM4Q6N022 2769 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 TRIM64A6NGJ6 449 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF99A8MXY4 864 aaPredicted RBP16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 PYCARD-AS1I3L0S3 204 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 PIPP12273 146 aaPredicted RBP16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 COX5AP20674 150 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 CSNK2BP67870 215 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 MRPS34P82930 218 aaKnown RBP16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 ST3GAL4Q11206 333 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 ENDOGQ14249 297 aaKnown RBP16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 CDSNQ15517 529 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 STK11Q15831 433 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF813Q6ZN06 617 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 OR6N2Q8NGY6 317 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 FGFBP3Q8TAT2 258 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 SIGLEC11Q96RL6 698 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 INTS14Q96SY0 518 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 CNN2Q99439 309 aaKnown RBP16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 TBX5Q99593 518 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 SH3GL3Q99963 347 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 COPS4Q9BT78 406 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 YTHDF1Q9BYJ9 559 aaKnown RBP16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 FGF20Q9NP95 211 aaPredicted RBP16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 TAS2R16Q9NYV7 291 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 CNOT2Q9NZN8 540 aaKnown RBP16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 JKAMPQ9P055 326 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 TPRKBQ9Y3C4 175 aa16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 SETXQ7Z333 2677 aaKnown RBP16.67■□□□□ 0.26
CHMP4A-201ENST00000347519 HIVEP3Q5T1R4 2406 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 A0A096LPE4 126 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 A0A1B0GUH1 482 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 A0A1W2PPZ6 126 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 EFCAB10A6NFE3 127 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 A8MXE2 369 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 EEF1E1-BLOC1S5C9J1V9 151 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF593O00488 134 aaPredicted RBP16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 MSTNO14793 375 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 EEF1E1O43324 174 aaKnown RBP16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 LYZL6O75951 148 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 CNOT4O95628 575 aaKnown RBP16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 CDK1P06493 297 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 LYNP07948 512 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 RPSAP08865 295 aaKnown RBP16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 C21orf33P30042 268 aaPredicted RBP16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 ENTPD1P49961 510 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 ADAM8P78325 824 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 RAB40BQ12829 278 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 C4orf17Q53FE4 359 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 CORO6Q6QEF8 472 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 SLC16A9Q7RTY1 509 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 CXorf67Q86X51 503 aaPredicted RBP16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 LINC00346Q8IVM7 164 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 SLC35F2Q8IXU6 374 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 LRRC18Q8N456 261 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF433Q8N7K0 673 aaPredicted RBP16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 OR1K1Q8NGR3 316 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 BCL2L2Q92843 193 aaPredicted RBP16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF649Q9BS31 505 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF416Q9BWM5 594 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 PIGMQ9H3S5 423 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 KCNG2Q9UJ96 466 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 LHFPL6Q9Y693 200 aa16.66■□□□□ 0.26
CHMP4A-201ENST00000347519 RELNP78509 3460 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 PRR32B1ATL7 298 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 WNT11O96014 354 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 MT-ND2P03891 347 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 HRGP04196 525 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 SPARCP09486 303 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 PATE4P0C8F1 98 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 MSR1P21757 451 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 ATP6V1E1P36543 226 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 BLVRAP53004 296 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 KCTD21Q4G0X4 260 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 KLHL22Q53GT1 634 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF627Q7L945 461 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 SSX6Q7RTT6 188 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 DPY19L4Q7Z388 723 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 ABHD12BQ7Z5M8 362 aaPredicted RBP16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 CDC20BQ86Y33 519 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 SKA3Q8IX90 412 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 SLC22A24Q8N4F4 322 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 OR10H4Q8NGA5 316 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 AMELYQ99218 206 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 TTTY10Q9BZA0 68 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF696Q9H7X3 374 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 SIAEQ9HAT2 523 aa16.65■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF503-AS2A6NEH8 195 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 DVL2O14641 736 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 IGHA1P01876 353 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF823P16415 610 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 NPR2P20594 1047 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 CD79BP40259 229 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 GABARAPL2P60520 117 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF85Q03923 595 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms